Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_G03
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 40 6e-04
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 39 8e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.097
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 31 0.22
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.90
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 29 0.90
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.1
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 28 2.1
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 27 4.8
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 27 4.8
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 4.8
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 26 8.4
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 240 HTRQLRXAPYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP--YPTTHGAPY 413
HTR P+P YP PV+ A P+ ++PYP+ G P TH APY
Sbjct: 172 HTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRRQTHFAPY 231
Score = 33.9 bits (74), Expect = 0.032
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +3
Query: 195 PATQGCAIPDNSGXLHTRQLRXAPYPTTQGLPYP-VAQSVPYPVAQSAPYPVAQNAPYPT 371
P Q P+ H R P PT P+ P+P + YP P
Sbjct: 141 PQVQSYCRPEPLSSNHVRSCPPFP-PTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPV 199
Query: 372 TQGAPYPTTHGAPYPVHHGVGGY 440
+ GA P H +PYP +G G+
Sbjct: 200 SPGATVPLQHHSPYPSDNGFPGH 222
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 39.1 bits (87), Expect = 8e-04
Identities = 24/78 (30%), Positives = 31/78 (39%)
Frame = +3
Query: 279 QGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPP 458
+GL P SV + S P P N+ P T A + AP P Y AP P
Sbjct: 43 RGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAPQP 102
Query: 459 GRPECGEPSTLGHRTSQP 512
P+ G P + +QP
Sbjct: 103 YPPQGGYPQQPYYYPNQP 120
Score = 27.1 bits (57), Expect = 3.6
Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Frame = +3
Query: 204 QGCAIPDNSGXLHTRQLRXAPYPTTQGLPYPVAQSVPYPVAQSAPYPVA-QNAPYPTTQG 380
+G IP H+ P P+ P + A AP P A QN Y
Sbjct: 43 RGLTIPPPPSVDHSAPPSGPP-PSYSNSAAPATPAASASSAAPAPAPAASQNRAYGAAP- 100
Query: 381 APYPTTHG---APYPVHHGVGGYSMAPPPGRPECGEPSTLGHR 500
PYP G PY + Y P +P +P+T R
Sbjct: 101 QPYPPQGGYPQQPYYYPNQPNYYPAQPAYAQPVYAQPATSARR 143
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Frame = +3
Query: 186 VPYPATQGCAIPDNSGXLHTRQLRXAPYPTTQGLPYPV------AQSVPYPVAQSAPYPV 347
VP P+++ +IP SG P P G+P PV A VP P P P
Sbjct: 1066 VPAPSSEIPSIPAPSGA--------PPVPAPSGIP-PVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 348 AQNAP---YPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPPGRPECGEPS 485
AP P+ P P GAP V + P G P +PS
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 35.1 bits (77), Expect = 0.014
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 12/97 (12%)
Frame = +3
Query: 264 PYPTTQGLPYPV---AQSVPYPVAQSAPYPVAQNAP---YPTTQGAPYPTTHGAPYPVHH 425
P P+ P PV A VP P + P P AP P+ P P PV
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 426 GVGGYSMAPPPG------RPECGEPSTLGHRTSQPRP 518
G PPP +P G P T+ P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 31.1 bits (67), Expect = 0.22
Identities = 37/125 (29%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Frame = +3
Query: 186 VPYPATQGCAIPDNSGXLHTRQLRXAPYPTTQGLPYPVAQS----VPYPVAQSAPYPVAQ 353
VP P+ +P SG P P+ P P S VP P A P P
Sbjct: 1142 VPKPSVAAPPVPAPSGA------PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 354 NAP---YPTTQGAPYPTTHGAPYPVHHGVGGY-------SMAPPPGRPECGEPSTLGHRT 503
AP P+ P P AP PV G + APP P PS R+
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAP-PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRS 1254
Query: 504 SQPRP 518
S P P
Sbjct: 1255 SVPSP 1259
Score = 29.9 bits (64), Expect = 0.52
Identities = 29/105 (27%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Frame = +3
Query: 186 VPYPATQGCAIPDNSGX--LHTRQLRXAPYPTTQG---LPYPVAQSVPYPVAQSAPYPVA 350
VP P+ +P SG + + P P G +P P + P P S PV
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV- 1181
Query: 351 QNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPPGRPECGEPS 485
P P P P AP VG + PP P PS
Sbjct: 1182 ---PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 5/68 (7%)
Frame = +3
Query: 270 PTTQGLPYPVAQSVPYPVAQS----APYPVAQNAPYPTTQGA-PYPTTHGAPYPVHHGVG 434
P + P+A+ P P S P P A P P A P P P PV
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP-PVPKSSS 1057
Query: 435 GYSMAPPP 458
G APPP
Sbjct: 1058 GAPSAPPP 1065
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = +3
Query: 264 PYPTTQGLPYPVAQSV-PYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGY 440
P P+ P PV + P P+ S P PV +++ + P P + G
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIPTSTP-PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 441 SMAPPPGRPECGEPSTLGHRTSQP 512
+ P G P +PS +P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKP 1107
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 390 PTTHGAPYPVHHGVGGYSMAPPPGRPECGE---PSTLGHRTSQPRPP 521
P H P P+HH G + M PPP E GE P + H + PP
Sbjct: 203 PGEHMPPPPMHHKPGEH-MPPPPMHHEPGEHMPPPPMHHEPGEHMPP 248
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 390 PTTHGAPYPVHHGVGGYSMAPPPGRPECGE---PSTLGHRTSQPRPP 521
P H P P+HH G + M PPP E GE P + H + PP
Sbjct: 229 PGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHHEPGEHMPP 274
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 390 PTTHGAPYPVHHGVGGYSMAPPPGRPECGE---PSTLGHRTSQPRPP 521
P H P P+HH G + M PPP E GE P + H + PP
Sbjct: 255 PGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHHEPGEHMPP 300
Score = 32.3 bits (70), Expect = 0.097
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 390 PTTHGAPYPVHHGVGGYSMAPPPGRPECGE---PSTLGHRTSQPRPP 521
P H P P+HH G + M PPP E GE P + H + PP
Sbjct: 281 PGEHMPPPPMHHEPGEH-MPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 390 PTTHGAPYPVHHGVGGYSMAPPPGRPECGE 479
P H P P+HH G + M PPP E GE
Sbjct: 307 PGEHMPPPPMHHEPGEH-MPPPPMHHEPGE 335
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +3
Query: 243 TRQLRXAPYP-TTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP---YPTTHGAP 410
T+ +P P T LP P +VP A + P V + PTT P PT GAP
Sbjct: 418 TQPTNASPAPLVTPSLPVPSIPAVPGMEAMAMPPGVTSSIAVPTTSSMPLQGMPTMFGAP 477
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.22
Identities = 28/106 (26%), Positives = 36/106 (33%)
Frame = +3
Query: 141 RPQTSSSMRLTRLRXVPYPATQGCAIPDNSGXLHTRQLRXAPYPTTQGLPYPVAQSVPYP 320
+P SS R P PA G + P + + P PT LP S+P
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS 434
Query: 321 VAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAPPP 458
S P P P + AP A P + + APPP
Sbjct: 435 APPSLPMGAPAAPPLPPS--APIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = +3
Query: 267 YPTTQGLPY-PVAQSVPYPV-AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGY 440
Y T L Y P +P V + P N P P G P G P P + G+
Sbjct: 476 YGATGPLIYGPGGYPIPAAVNGRGMPMVPGHNGPMPMYPGMPTQFPAGGPAPGYPGMNAR 535
Query: 441 SMAPPPGRP 467
P GRP
Sbjct: 536 GPVPAQGRP 544
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 288 PYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 410
P P Q+ P + SAP Q YP Q APYP P
Sbjct: 208 PPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYPPVQAYP 247
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +3
Query: 300 AQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAP 452
AQ P P Q+ P + +AP Q YP APYP V Y AP
Sbjct: 204 AQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQ-APYP---PVQAYPQAP 250
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 29.1 bits (62), Expect = 0.90
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = +3
Query: 270 PTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMA 449
PT++ P+P + A P PV QN P T+ P P P+ + V
Sbjct: 964 PTSKSKPFPRLATGGSTAAARGPRPVVQNKP-AATKPVSMPAAKSKPAPMANPVSTAQQT 1022
Query: 450 P--PPGRPECGEPST 488
PP P+T
Sbjct: 1023 QNRPPAPAMQARPNT 1037
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = +3
Query: 261 APYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 410
A PT G P A V P A PV AP T AP P++ AP
Sbjct: 1430 ASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVT-NAPAPSSAPAP 1478
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 270 PTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTT 398
P T + + P ++ VA+N PYP Q P T+
Sbjct: 195 PKTSAVSHQKPHEAPSTAVKAPTATVAENEPYPKPQSVPTTTS 237
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +3
Query: 381 APYPTTHGAP--YPVHHGVGGYSMAPPPGRPECGEPSTLGHRTSQPR 515
AP +G P YP APP G P+ G P+ QP+
Sbjct: 15 APPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGGYPAQQPMYVQQPQ 61
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +3
Query: 222 DNSGXLHTRQLRXAPY---PTTQGLPYPVAQSVPYPVAQSAPYPVAQNAP 362
DN+ ++ R P PTT G+ Y + + PYP Q+ + + + P
Sbjct: 4 DNTPSINRRNNENPPQSSLPTTSGIVYNMFPACPYPHVQNPAFHGSVDVP 53
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 281 GSTIPSCSECAIPGCSECAISGCSEC 358
GS+ C C PG S+C CSEC
Sbjct: 52 GSSQDRCIICGAPGVSDCYY--CSEC 75
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.8 bits (54), Expect = 8.4
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = +2
Query: 365 PNNAGCTIPDNARCALPSPSWCRRILDGSTPWQT*MWRTQHPRAPNLAAAPPTYEQAVTQ 544
P N G I DN + P+ L S + + Q P N+ TYEQ +
Sbjct: 7 PENGG-QINDNINYSEKRPTMLPENLSLSN-YDMDSFLGQFPSDNNMQLPHSTYEQHLQG 64
Query: 545 HKQPAFNPNY 574
+Q NPNY
Sbjct: 65 EQQNPTNPNY 74
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,381,790
Number of Sequences: 5004
Number of extensions: 68973
Number of successful extensions: 244
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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