Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_G03
(900 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 30 0.083
EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle... 27 0.78
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 3.1
AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase... 25 4.1
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 5.5
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 24 7.2
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 9.6
AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin s... 23 9.6
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 30.3 bits (65), Expect = 0.083
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3
Query: 270 PTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 419
P + +P + + VPY V + PYP+ P+P + PYPV
Sbjct: 211 PIYKVIPKVIEKPVPYTVEK--PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258
Score = 29.9 bits (64), Expect = 0.11
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 264 PYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYP 368
P P T PYP+ P+PV + V PYP
Sbjct: 223 PVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPYP 257
Score = 27.1 bits (57), Expect = 0.78
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +3
Query: 288 PYP----VAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 419
PYP V Q + P+ + P + + PY T PYP P+PV
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPY--TVEKPYPIEVEKPFPV 242
Score = 25.0 bits (52), Expect = 3.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 264 PYPTTQGLPYPVAQSVPYPVAQSAPYPV 347
PYP P+PV + V PYPV
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258
Score = 23.4 bits (48), Expect = 9.6
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = +3
Query: 264 PYPTTQGLPYPVAQSVPYP----VAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPV 419
P+P +P+ V +P P V P + P P P T PYP+
Sbjct: 179 PHPVPIAVPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPI 234
>EF382662-1|ABN54495.1| 178|Anopheles gambiae CPF family cuticle
protein protein.
Length = 178
Score = 27.1 bits (57), Expect = 0.78
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = +3
Query: 291 YPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAP--YPTTHGAPYPVHHG 428
YP A P A + A YP AP Y T AP HG
Sbjct: 116 YPAAAHYAAPAVHYAAHAPIVKAAYPAAYAAPLAYKTPLAAPVAAVHG 163
Score = 24.2 bits (50), Expect = 5.5
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +3
Query: 300 AQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAP 410
A +V YP A P A + A YP + AP
Sbjct: 111 APAVHYPAAAHYAAPAVHYAAHAPIVKAAYPAAYAAP 147
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.0 bits (52), Expect = 3.1
Identities = 24/86 (27%), Positives = 29/86 (33%)
Frame = +3
Query: 264 PYPTTQGLPYPVAQSVPYPVAQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYS 443
P G+P P Q + P P P P G YP G P P+ +
Sbjct: 178 PARPNPGMP-PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQM---- 232
Query: 444 MAPPPGRPECGEPSTLGHRTSQPRPP 521
PPG +P QPRPP
Sbjct: 233 ---PPGAVPGMQPG------MQPRPP 249
>AY280613-1|AAQ21366.1| 257|Anopheles gambiae carbonic anhydrase
alternate isoform protein.
Length = 257
Score = 24.6 bits (51), Expect = 4.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 477 RHIQVCQGVEPSSILLHHDGLGKAHRALSG 388
R + G++P H DGLGKA +G
Sbjct: 18 RSTVIRDGIQPLDYFGHWDGLGKAKMVNTG 47
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.2 bits (50), Expect = 5.5
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 481 PAPSGTEPRSRAPHLRAGGHTTQAAGVQPQLLTPTDXPRAATPINMFL 624
PAP P P AGG AG +P L AA P+ + +
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILV 630
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 23.8 bits (49), Expect = 7.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 771 GRCRQECRNPXAPPVCIAVSLLSPRLHTARLYL 673
G+C +C N P + ++L RL T LYL
Sbjct: 83 GKCIPKCSNENMPLSKTSTAILFVRLVTPCLYL 115
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.4 bits (48), Expect = 9.6
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 324 AQSAPYPVAQNAPYPTTQGAPYPTTHGAPYPVHHGVGGYSMAP-PPGRP 467
A +A Y + AP P T G P P P P + M P PG P
Sbjct: 52 ATTAAYKAGKIAPNPFTAGPPKPNI-SIPPPTMNMPPRPGMIPGMPGAP 99
>AF492464-1|AAM11657.1| 803|Anopheles gambiae beta nu integrin
subunit AgBnu protein.
Length = 803
Score = 23.4 bits (48), Expect = 9.6
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 299 CSECAIPGCSECAISGCSECAIPNNAGCTIPDNARC 406
C +C E C+ECA + + C PD+ C
Sbjct: 543 CGQCYCNPGFEGEHCECNECATIDGSICGGPDHGIC 578
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 936,403
Number of Sequences: 2352
Number of extensions: 19483
Number of successful extensions: 59
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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