Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_G01
         (865 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        66   1e-12
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.1  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   9.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.1  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 66.5 bits (155), Expect = 1e-12
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = +2

Query: 221 TKPAIRRLARRGGVKRISGLIYEETRGVLKVFL 319
           TKPAIRRLARRGGVKRISGLIYEE RGVLKVFL
Sbjct: 31  TKPAIRRLARRGGVKRISGLIYEERRGVLKVFL 63



 Score = 58.4 bits (135), Expect = 3e-10
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +3

Query: 267 VSPVLYTKRPAAFSKCSSXNVIRDAVTYTEHAKRKTVTAMDVVYAL 404
           +S ++Y +R     K    NVIRDAV YTEHAKRKTVTAMDVVYAL
Sbjct: 47  ISGLIYEERRGVL-KVFLENVIRDAVAYTEHAKRKTVTAMDVVYAL 91


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 301 RSQSVPRKT*SATLSHTPNTPRGRPSP 381
           R Q+V ++T S T   TP +P G   P
Sbjct: 357 RQQTVLQRTPSGTEPKTPTSPTGPSGP 383


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 548 SGDSKQASKQASNTRRGPSRNMFQELFAVVD 640
           + + + A  + S   R   RN+FQEL  + +
Sbjct: 377 AAEHRTARAELSRAIRASKRNLFQELIEIAE 407


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/48 (27%), Positives = 20/48 (41%)
 Frame = +1

Query: 292 DPRRSQSVPRKT*SATLSHTPNTPRGRPSPLWMLCTL*NAKVAPCTVS 435
           DP  + + P  T + T S  P  P    + +W+  T      AP T +
Sbjct: 190 DPTATTTTPASTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHAPTTTT 237


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 646  KSIASDVGSFNYY 684
            KS+++ +GSFNYY
Sbjct: 1509 KSVSNFLGSFNYY 1521


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,921
Number of Sequences: 2352
Number of extensions: 11797
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)