Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F23
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    25   0.76 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.4  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 662 APSDMMDNRIKAIKEELVRNNCK 730
           AP D + N+IK    E++  NC+
Sbjct: 43  APCDALGNQIKGALPEIIGKNCE 65


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 422 PKDPTGTSADSVDNPV 469
           P++P GT+   ++NP+
Sbjct: 746 PRNPVGTNPHDINNPL 761


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 422 PKDPTGTSADSVDNPV 469
           P++P GT+   ++NP+
Sbjct: 638 PRNPVGTNPHDINNPL 653


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 484 WQCFYYWIV 458
           W+C Y WIV
Sbjct: 161 WRCLYRWIV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,761
Number of Sequences: 336
Number of extensions: 4029
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)