Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F23
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   1.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.6  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   6.2  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +2

Query: 599 ASVKRIAEVALAYAKAGAHVVAPSDMMDNRIKAIKEELV 715
           +SVK   E++L   K    +++ ++ +   +K + EELV
Sbjct: 832 SSVKSFMELSLRSVKDRETIISAAEKIAEELKIVPEELV 870


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 545 TSHGHCGLLKSGGGIDHEASVKRIAEVALAY 637
           T++G  GLLK GGG  +   ++ +  V LA+
Sbjct: 367 TTNGRKGLLKGGGG--YLLGIQCLTVVCLAF 395


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 245 RCLCSVLVTFSRQHDGIRLAAHVQVLNTNYSLSLFL*LNENMYFNYDFLQ 96
           RCL S+  T+ R    +   A  Q+L+  Y++ L    N + +  Y FL+
Sbjct: 437 RCLLSLEKTYERDTCLLASDALKQILSAAYNVELH---NSSPFSIYSFLE 483


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 245 RCLCSVLVTFSRQHDGIRLAAHVQVLNTNYSLSLFL*LNENMYFNYDFLQ 96
           RCL S+  T+ R    +   A  Q+L+  Y++ L    N + +  Y FL+
Sbjct: 475 RCLLSLEKTYERDTCLLASDALKQILSAAYNVELH---NSSPFSIYSFLE 521


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 430 VLRQCLHNPKNE 395
           ++RQC+ N KNE
Sbjct: 97  IIRQCVDNAKNE 108


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,677
Number of Sequences: 438
Number of extensions: 4908
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)