Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F22
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   4.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 776 LLILVCKFRLSFKRDY 823
           +LIL+C   L+FK+ Y
Sbjct: 180 VLILICNIALAFKQRY 195


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 297 ICAPTTPCAWT 329
           IC P T C+WT
Sbjct: 142 ICYPLTYCSWT 152


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 671 CMSTCNIIYLSTCKN 627
           C S  N +Y S C+N
Sbjct: 160 CFSMLNYVYSSKCEN 174


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 595 LLYIHYNFHYPFLHVDKYIILHVDIHRYNSHVLLF 699
           LL I+Y F+Y F+    +++L V I+ +    LLF
Sbjct: 235 LLCIYY-FYYAFILFTVHLLLLVCIYYFYYMHLLF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,173
Number of Sequences: 336
Number of extensions: 3251
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)