Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_F16
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 35 0.088
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 35 0.088
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 34 0.15
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.82
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.82
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.82
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.82
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.5
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.5
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.4
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 29 4.4
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 29 4.4
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 29 4.4
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 29 4.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.4
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 29 4.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 7.7
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 28 7.7
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 476 GGGGGXFFXXKXPPPPGXXGXXXXXPPPPP 565
G GGG PPP G G PPPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 34.7 bits (76), Expect = 0.088
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 476 GGGGGXFFXXKXPPPPGXXGXXXXXPPPPP 565
G GGG PPP G G PPPPP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 33.9 bits (74), Expect = 0.15
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +2
Query: 449 SXFFFXXXXGGGGGXFFXXKXP----PPPGXXGXXXXXPPPPP 565
S F F GGGGG P PPP G PPPPP
Sbjct: 16 SGFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPP 58
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPPPPKKXXPXXXXPPPWGGXXAP 306
GG PP PPPP+ P PPP G P
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 513 PPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXXGXXPKKNXXXTXP 692
PPP G PPPP PPP G P G P P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 693 XXGP 704
P
Sbjct: 300 PPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPPPPKKXXPXXXXPPPWGGXXAP 306
GG PP PPPP+ P PPP G P
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 513 PPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXXGXXPKKNXXXTXP 692
PPP G PPPP PPP G P G P P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 693 XXGP 704
P
Sbjct: 321 PPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPPPPKKXXPXXXXPPPWGGXXAP 306
GG PP PPPP+ P PPP G P
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = +3
Query: 513 PPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXXGXXPKKNXXXTXP 692
PPP G PPPP PPP G P G P P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 693 XXGP 704
P
Sbjct: 306 PPPP 309
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 564 GGGGGXXXKXPXXPGGGGXFX*KKXPPPPP 475
GGGGG GGGG PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -1
Query: 564 GGGGGXXXKXPXXPGGGGXFX*KKXPPPPP 475
GGGGG GGGG PPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGG 294
PP PPPP P PPP GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/94 (24%), Positives = 24/94 (25%)
Frame = +3
Query: 474 GGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXX 653
GG + PPP G G PPPP P PPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 756
Query: 654 GXXPKKNXXXTXPXXGPXXXXXXXXXVXXXAPPP 755
G P P P PPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP P PPP G P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPP---PPKKXXPXXXXPPPWGGXXAPXKKKKXXXXGXPP 345
GG PP PP PP P PPP G P G PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXKXXP 580
PPPPG PPPPP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP PPP G AP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPP 762
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGG 294
PP PPPP P PPP GG
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGG 779
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/94 (24%), Positives = 24/94 (25%)
Frame = +3
Query: 474 GGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXX 653
GG + PPP G G PPPP P PPP P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 756
Query: 654 GXXPKKNXXXTXPXXGPXXXXXXXXXVXXXAPPP 755
G P P P PPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP P PPP G P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPP---PPKKXXPXXXXPPPWGGXXAPXKKKKXXXXGXPP 345
GG PP PP PP P PPP G P G PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXKXXP 580
PPPPG PPPPP P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLP 736
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP PPP G AP
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPP 746
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPP 762
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPP 788
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 772 PPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.82
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGG 294
PP PPPP P PPP GG
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGG 362
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/94 (24%), Positives = 24/94 (25%)
Frame = +3
Query: 474 GGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXPXXXXXXXXXFSPPPRGXXXXPXXX 653
GG + PPP G G PPPP P PPP P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGP----PPPPPPGGLPPISG 339
Query: 654 GXXPKKNXXXTXPXXGPXXXXXXXXXVXXXAPPP 755
G P P P PPP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP P PPP G P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 3/53 (5%)
Frame = +1
Query: 196 GGKXXFXXXXXPPXPP---PPKKXXPXXXXPPPWGGXXAPXKKKKXXXXGXPP 345
GG PP PP PP P PPP G P G PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXKXXP 580
PPPPG PPPPP P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLP 319
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP PPP G AP
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 312 PPPPGGLPPITGGPPPPP 329
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPP 345
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 343 PPPPPPGGCPPPPPPPPP 360
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPP 371
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 355 PPPPPPGGFKGGPPPPPP 372
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 459 FFXXXGGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXP 581
F GGGGG PP G G G PPP P
Sbjct: 17 FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAP 57
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 579 GXXLXGGGGGXXXKXPXXPGGGGXFX*KKXPPPPP 475
G GGGGG GGGG PPPPP
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAP 306
PP PPPP PPP GG P
Sbjct: 577 PPPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 194 GGXKXIFXXXXXPXXPPPPKKXXPXXXXPPLGGGXXPPXKKKNXXXXGXPP 346
GG + P PPPP P P GGG PP G PP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGA-PGGGGGMYPPLIPTRPGPGGPPP 824
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 194 GGXKXIFXXXXXPXXPPPPKKXXPXXXXPPLGGGXXPPXKKKNXXXXGXPP 346
GG + P PPPP P P GGG PP G PP
Sbjct: 775 GGRQAPMPPRGGPGAPPPPGMRPPPGA-PGGGGGMYPPLIPTRPGPGGPPP 824
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/90 (27%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWG---GXXAPXKKKKXXXXGXPPXXXGKKKXFFXKKXXXXX 399
PP PPPP P PP G P ++ G PP G+
Sbjct: 716 PPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGR------GAGPMSS 769
Query: 400 FXXPPKXXKKXXXPPXFSFFFXXXXGGGGG 489
F PP+ PP F GG GG
Sbjct: 770 FPPPPRGGMHHMPPPP---SFRGGRGGHGG 796
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP + P PPP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP+K PPP
Sbjct: 122 PPPPPPPRKSRAGGSSPPP 140
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/70 (24%), Positives = 17/70 (24%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXKXXPXXXIXXXXXXXXXXXXXXXXSXXXGXXPQKKXXXNPP 691
PPPP PPPPP P P NPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Query: 692 XXGPXPXXXP 721
P P P
Sbjct: 185 RTPPSPIPPP 194
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP + P PPP
Sbjct: 147 PPRPPPPVELSPPPRPPPP 165
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP + P PPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP + P PPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP + P PPP
Sbjct: 788 PPRPPPPVELSPPPRPPPP 806
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPPWGGXXAPXKKKK 321
PP PPPP PPP G P K K
Sbjct: 84 PPPPPPPPPPTLKAPPPPPILGLKTPSKSLK 114
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +2
Query: 449 SXFFFXXXXGGGGGXFFXXKXPPP---PGXXGXXXXXPPPPPXKXXP 580
S F F GGGGG PPP P PPPP P
Sbjct: 15 SAFLFPSAGGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAP 61
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXK 571
PPPP G PPPPP +
Sbjct: 287 PPPPPSSGMWPPPPPPPPGR 306
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 411 PXXPXKXXXPPXXLXFFFXXXGGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXPXXX 590
P P PP F G GG PPP G G PPPP P
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGG--------MPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Query: 591 XXXXXXFSPPPRGXXXXPXXXGXXP 665
PPP P G P
Sbjct: 360 PGMYP--PPPPSRPPAPPSGHGMIP 382
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPPXK 571
PPPP G PPPPP +
Sbjct: 297 PPPPPSSGMWPPPPPPPPGR 316
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/85 (28%), Positives = 24/85 (28%)
Frame = +3
Query: 411 PXXPXKXXXPPXXLXFFFXXXGGGGGVXFFXXXXPPPXGXGXFXXGXXPPPPXKXXPXXX 590
P P PP F G GG PPP G G PPPP P
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGG--------MPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Query: 591 XXXXXXFSPPPRGXXXXPXXXGXXP 665
PPP P G P
Sbjct: 370 PGMYP--PPPPSRPPAPPSGHGMIP 392
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP P PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP P PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPP 555
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 41 PPPPPPCGGGYEAPPPPP 58
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPP G PPPPP
Sbjct: 42 PPPPPCGGGYEAPPPPPP 59
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 229 PPXPPPPKKXXPXXXXPPP 285
PP PPPP P PPP
Sbjct: 133 PPPPPPPHYPPPPPHYPPP 151
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 512 PPPPGXXGXXXXXPPPPP 565
PPPPG PPPPP
Sbjct: 2279 PPPPGYMHTPPLPPPPPP 2296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,430,971
Number of Sequences: 27780
Number of extensions: 265549
Number of successful extensions: 2720
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1931
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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