Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F15
         (872 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   4.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   4.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   4.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   4.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   4.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 248 PR*NSTNQDYGLNLPFDIVPFPSK 177
           P+ N  N+ +  NLP   +P P K
Sbjct: 227 PQNNPKNKQHNFNLPPGAIPVPDK 250


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 600 IHVFS*SMFTCALWYYN 550
           +H+ +     CALWY N
Sbjct: 163 LHIITMINMNCALWYIN 179


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 655 CPTFLANPFQALTTRNRKYSCFLLVYV 575
           CP   + P   +TT  ++Y   LLV++
Sbjct: 58  CPRKYSTPLAKITTILQRYCSVLLVFL 84


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 600 IHVFS*SMFTCALWYYN 550
           +H+ +     CALWY N
Sbjct: 163 LHIITMINMNCALWYIN 179


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 600 IHVFS*SMFTCALWYYN 550
           +H+ +     CALWY N
Sbjct: 163 LHIITMINMNCALWYIN 179


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 655 CPTFLANPFQALTTRNRKYSCFLLVYV 575
           CP   + P   +TT  ++Y   LLV++
Sbjct: 54  CPRKYSTPLAKITTILQRYCSVLLVFL 80


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 578 CSLVLFGITTTFCCTKKFSNI 516
           C+ ++F +   FCC   F N+
Sbjct: 171 CAFIIFTMHLLFCCAFIFFNM 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,821
Number of Sequences: 336
Number of extensions: 5006
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)