Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F10
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    29   0.062
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    29   0.062
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   7.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.1  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +1

Query: 703 PSSMADLHHSWEISNCNQNSNMGIFFLTIEIFQIIFCML 819
           PSS  DL+++  +SN N++S+  +F   I    ++FC++
Sbjct: 40  PSSTIDLYNTSSVSNFNESSS-SVFPNYIRTTSMVFCII 77


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 28.7 bits (61), Expect = 0.062
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +1

Query: 703 PSSMADLHHSWEISNCNQNSNMGIFFLTIEIFQIIFCML 819
           PSS  DL+++  +SN N++S+  +F   I    ++FC++
Sbjct: 40  PSSTIDLYNTSSVSNFNESSS-SVFPNYIRTTSMVFCII 77


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 351 GHYFLEPGTMPWKSSL 398
           GH++L+ G  PWK S+
Sbjct: 461 GHWYLDCGFGPWKPSM 476


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 182 IMSEIVENKVDELPDLDNLLQCPVC 256
           +M  I++NKV+++   + L++ P C
Sbjct: 563 VMKSILDNKVEKVVVSNRLVESPCC 587


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 263 FHNILDTEVSYPSLAIRQPYFQL 195
           F NI + +V++ SLA+  PY  L
Sbjct: 118 FKNIEEVDVAFRSLAVWVPYKHL 140


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 263 FHNILDTEVSYPSLAIRQPYFQL 195
           F NI + +V++ SLA+  PY  L
Sbjct: 118 FKNIEEVDVAFRSLAVWVPYKHL 140


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 155 KNQSSHYVYLAISYNVKVKNKKTAGTFTN 69
           KNQ      L I   V +KNK T+ T T+
Sbjct: 391 KNQKGEVTVLEIEDWVLLKNKVTSDTRTH 419


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 221 PDLDNLLQCPVCYEIP 268
           P+ D ++  P+C +IP
Sbjct: 317 PNFDKMIGNPICVQIP 332


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 245 TEVSYPSLAIRQPYFQLSP 189
           T V+ PS+++  PY   SP
Sbjct: 706 TSVASPSVSVASPYMLQSP 724


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 245 TEVSYPSLAIRQPYFQLSP 189
           T V+ PS+++  PY   SP
Sbjct: 598 TSVASPSVSVASPYMLQSP 616


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,847
Number of Sequences: 336
Number of extensions: 4351
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)