Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F09
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.8  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   8.5  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   8.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   8.5  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   8.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   8.5  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   8.5  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 858 GRPPLSHRPRWTQSPSSAVGRSTHTS 781
           G P L+  P W Q+ + A G +  T+
Sbjct: 105 GSPKLTPYPNWAQNKAGACGSAITTA 130


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 799 PLNTYELSRSLNSHRGPTY 743
           P N Y     LN   GPTY
Sbjct: 377 PPNAYRFRPPLNPRFGPTY 395


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 799 PLNTYELSRSLNSHRGPTY 743
           P N Y     LN   GPTY
Sbjct: 388 PPNAYRFRPPLNPRFGPTY 406


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 799 PLNTYELSRSLNSHRGPTY 743
           P N Y     LN   GPTY
Sbjct: 388 PPNAYRFRPPLNPRFGPTY 406


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -3

Query: 799 PLNTYELSRSLNSHRGPTY 743
           P N Y     LN   GPTY
Sbjct: 377 PPNAYRFRPPLNPRFGPTY 395


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 693 YRCDIGEPDYNCECQSGYV 749
           Y+   G+P  NCE ++G +
Sbjct: 458 YQSQYGDPINNCEIKAGEI 476


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 768 KDLDNSYVLSGRQLMMETASIAGGATVAVFLAXL 869
           K  DN  + + R L+ +   + GG++ A  +A L
Sbjct: 283 KTEDNESLNAARMLIRQEGLLCGGSSGAALIAAL 316


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,624
Number of Sequences: 438
Number of extensions: 4303
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)