Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F07
         (945 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56A10 Cluster: PREDICTED: similar to CG6958-PA;...    40   0.070
UniRef50_UPI000051A219 Cluster: PREDICTED: similar to CG6958-PA;...    38   0.28 

>UniRef50_UPI0000D56A10 Cluster: PREDICTED: similar to CG6958-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG6958-PA - Tribolium castaneum
          Length = 1138

 Score = 40.3 bits (90), Expect = 0.070
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
 Frame = +2

Query: 350 DMDFNTTGAMRSPFSPRVRQSISGSKAWRPIFLXKKAKVNLCSHKANKLAM*SIKLHR*H 529
           D  FN++ + RSPFSPR RQ+++  K   P F  +K+     S K+ +     +     +
Sbjct: 2   DRSFNSSFSTRSPFSPRSRQNLNAKKIIPPNF--RKSSRFSVSGKSTQSVQIILSTPYNY 59

Query: 530 *KRTGHLCQ*WSQRLL--PSQVETSQCRLSTCGWCWVVSGRRIL 655
            +R G          L    +      R+S  G+ WVV GRR+L
Sbjct: 60  VERFGQTFPVLITEALTFADRNTVVSARISKLGYLWVVCGRRLL 103


>UniRef50_UPI000051A219 Cluster: PREDICTED: similar to CG6958-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG6958-PA
           - Apis mellifera
          Length = 1123

 Score = 38.3 bits (85), Expect = 0.28
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
 Frame = +1

Query: 502 VIYKTPSMTLETYGAPMPVMVTEALAFASGDISVP---PLD--LWLVLG 633
           +I K+P+  +E++G+ +PV+VTEAL F   +I+V     +D   WLV G
Sbjct: 35  IICKSPNHVVESFGSSLPVLVTEALTFVDRNIAVSVNISIDGWAWLVCG 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,827,975
Number of Sequences: 1657284
Number of extensions: 13645258
Number of successful extensions: 28260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28247
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)