Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F07
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0757 + 26964983-26965048,26965470-26965874,26966921-269678...    28   9.4  
03_02_0487 + 8821543-8821866,8821958-8822335,8822928-8823020,882...    28   9.4  

>11_06_0757 +
           26964983-26965048,26965470-26965874,26966921-26967814,
           26972063-26972512,26973013-26973637,26994014-26994651,
           26994967-26995032
          Length = 1047

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 627 HQPQVERRH*DVSTCEGKSLCDHHWHRC 544
           H P       +   C+  ++CDHH H C
Sbjct: 757 HLPAASVSSLECGYCDAATVCDHHGHHC 784


>03_02_0487 +
           8821543-8821866,8821958-8822335,8822928-8823020,
           8823613-8824236
          Length = 472

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 632 PNTSHRSRGGTEMSPLAKARASVTITGIGAPYVSSVIDGVL*ITSPVCSLCD 477
           PN S RS G  E   +++    + +  IGAP +   +D      SP   LC+
Sbjct: 52  PNASDRSGGAGEPCSMSRGELQLMLGVIGAPLIPLPVDHAK--QSPCSVLCE 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,181,830
Number of Sequences: 37544
Number of extensions: 421826
Number of successful extensions: 909
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)