Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F06
         (950 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   125   7e-31
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    50   2e-08
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    49   5e-08
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                40   3e-05
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    38   1e-04
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    38   1e-04
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    34   0.002
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   7.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  125 bits (301), Expect = 7e-31
 Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 1/207 (0%)
 Frame = +3

Query: 81   VTLTKKIGSGNYGHVFKGWMERDNQESHRKEVAIKKLTRQASERNGTLYEDFKNELEIMK 260
            +T+   IG G +G V +G ++         +VAIK L   ++++      DF  E  IM 
Sbjct: 633  ITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADK---ARNDFLTEASIMG 689

Query: 261  SLQHINIVEILGYAWDQGPEVLIVMEYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGM 440
              +H N++ + G      P V+I+ E++E GSL+ +L+    K ++  L+   + IA+GM
Sbjct: 690  QFEHPNVIFLQGVVTKSNP-VMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGM 748

Query: 441  DHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPK-EENTYRLKTERLLPINWYAP 617
             +++  N VHRDLA RN+LV      KI+DFGL+R I    E  Y  +  + +P+ W AP
Sbjct: 749  QYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGK-IPVRWTAP 807

Query: 618  ESAVEPWHFSTKSDVWSYGVTAWEIFT 698
            E A+    F++ SDVWS G+  WE+ +
Sbjct: 808  E-AIAFRKFTSASDVWSMGIVCWEVMS 833


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 25/72 (34%), Positives = 42/72 (58%)
 Frame = +3

Query: 330 VMEYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNK 509
           VMEY+  G L Y ++  G K +    + Y  +IA G+  +  + +V+RDL   N+L+   
Sbjct: 63  VMEYVNGGDLMYQIQQCG-KFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQD 121

Query: 510 YHVKISDFGLAR 545
            H+KI+DFG+ +
Sbjct: 122 GHIKIADFGMCK 133


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 49.2 bits (112), Expect = 5e-08
 Identities = 28/95 (29%), Positives = 50/95 (52%)
 Frame = +3

Query: 414 YCKDIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTYRLKTERL 593
           Y   +    D++ ++N+++RDL   N+L+ ++ +VK+ DFG A+ +     T+   T   
Sbjct: 471 YTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTW---TFCG 527

Query: 594 LPINWYAPESAVEPWHFSTKSDVWSYGVTAWEIFT 698
            P  + APE  +   H    +D WS GV  +E+ T
Sbjct: 528 TP-EYVAPEVILNKGH-DISADYWSLGVLMFELLT 560


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 40.3 bits (90), Expect = 3e-05
 Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 4/163 (2%)
 Frame = +3

Query: 225 YEDFKNELEIMKSLQHINIVEILGYAWDQGPEV-LIVMEYLE---EGSLNYYLKFQGEKL 392
           Y +  N  +    L+H NIV++L    +QG  + LI ME      +  L+  +  + E++
Sbjct: 101 YSNMLNSEKHASFLKHSNIVKVLMI--EQGASLSLITMELCGTTLQNRLDEAILIKNERI 158

Query: 393 RISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNKYHVKISDFGLARIIPKEENTY 572
            I       K I   +       +VH D+  +NIL+      K++DFG + +I       
Sbjct: 159 CI------LKSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPN--- 209

Query: 573 RLKTERLLPINWYAPESAVEPWHFSTKSDVWSYGVTAWEIFTR 701
             + ++      Y     ++    +  +D++S G+ AW++  R
Sbjct: 210 --EIDKFYGTPGYTAPEVIKQNRPTPAADIYSLGIVAWQMLFR 250


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
            isoform B protein.
          Length = 931

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
 Frame = +3

Query: 18   HYREFLKISLES-----IVSQGKTYLVTLTKKIGSGNYGHVFKGWMERDNQESHRKEVAI 182
            H     K++LES     +V  GK +     ++IG G YG VF      D         AI
Sbjct: 571  HAPRLAKLALESTSMIDVVRYGKPHCA---EEIGRGQYGIVFAC----DGWGGKAGPCAI 623

Query: 183  KKLTRQASERNGTLYEDFKNELEIMKSL-QHINIVEILGYAWDQ--------GPEVLIVM 335
            K +           + D   E    +S+  H  IV++ G   D         G  VL++ 
Sbjct: 624  KSVVPSDESH----WNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLIS 679

Query: 336  EYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNKYH 515
            + L   S + Y   +   L     ++   D+  G+ ++ ++ +VHRD+  +N+L+  +  
Sbjct: 680  DRL---SRDLYCGIRAG-LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENR 735

Query: 516  VKISDFGLARIIPKEENTYRLKTERLLPINWYAPESAVEPWHFSTKSDVWSYGVTAW 686
             K++DFG             L +    P++  APE  +   H+ +  DV+++G+  W
Sbjct: 736  AKLTDFGFC-----ITEVMMLGSIVGTPVH-MAPE--LLSGHYDSSVDVYAFGILFW 784


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 37.9 bits (84), Expect = 1e-04
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 14/237 (5%)
 Frame = +3

Query: 18   HYREFLKISLES-----IVSQGKTYLVTLTKKIGSGNYGHVFKGWMERDNQESHRKEVAI 182
            H     K++LES     +V  GK +     ++IG G YG VF      D         AI
Sbjct: 609  HAPRLAKLALESTSMIDVVRYGKPHCA---EEIGRGQYGIVFAC----DGWGGKAGPCAI 661

Query: 183  KKLTRQASERNGTLYEDFKNELEIMKSL-QHINIVEILGYAWDQ--------GPEVLIVM 335
            K +           + D   E    +S+  H  IV++ G   D         G  VL++ 
Sbjct: 662  KSVVPSDESH----WNDLAMEFYYNRSIPDHKRIVKLRGSIIDHSYGGGFGFGSAVLLIS 717

Query: 336  EYLEEGSLNYYLKFQGEKLRISHLLKYCKDIATGMDHVSAKNVVHRDLATRNILVVNKYH 515
            + L   S + Y   +   L     ++   D+  G+ ++ ++ +VHRD+  +N+L+  +  
Sbjct: 718  DRL---SRDLYCGIRAG-LSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENR 773

Query: 516  VKISDFGLARIIPKEENTYRLKTERLLPINWYAPESAVEPWHFSTKSDVWSYGVTAW 686
             K++DFG             L +    P++  APE  +   H+ +  DV+++G+  W
Sbjct: 774  AKLTDFGFC-----ITEVMMLGSIVGTPVH-MAPE--LLSGHYDSSVDVYAFGILFW 822


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 34.3 bits (75), Expect = 0.002
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 420 KDIATGMDHVSAKNVVHRDLATRNILVVNKYH---VKISDFGLA 542
           + I   + H     VVHRDL   N+L+ +K     VK++DFGLA
Sbjct: 16  QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 59


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 504 SPLECSASPNPDARRF*QTRGPYPLLCPYN 415
           S L C+    P   R+     P PL CP N
Sbjct: 194 SALACAIMLGPRLGRYDNGIDPLPLGCPVN 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,546
Number of Sequences: 438
Number of extensions: 4649
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)