Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_F04
         (920 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1638 + 28299063-28299625,28301055-28301100,28301596-28301637    175   5e-44
07_03_1408 - 26353389-26355191                                         31   1.7  
03_03_0094 + 14378953-14380728                                         30   2.3  
12_01_0482 - 3791630-3791698,3791983-3792124,3792202-3792344,379...    29   5.2  
06_01_0085 - 678144-678335,678466-678639,678721-678912,679756-67...    29   6.9  

>07_03_1638 + 28299063-28299625,28301055-28301100,28301596-28301637
          Length = 216

 Score =  175 bits (425), Expect = 5e-44
 Identities = 85/187 (45%), Positives = 119/187 (63%), Gaps = 8/187 (4%)
 Frame = +3

Query: 135 MKVLSEDRTRILFEKLTKYIGVNVKLLIDRPD--------GTYCFREKKDRVYYISEKLL 290
           M+ L E  T+++FEKL K+ G N+K L++RP         G YC R  K+RVYY SE L+
Sbjct: 1   MRALDEKETKMVFEKLFKFTGPNLKHLLERPAVEGPDPQAGRYCLRLHKNRVYYASEALV 60

Query: 291 HLAQTVKPDNLISAGTCFGKFTKTNKFRLHITALTYISPYAPFKVWVKPSAEQQFLYGHH 470
             A  V    L   GT  GKFT    F L + AL  ++ +A  +VW+KP  E+ FL+G+ 
Sbjct: 61  RRATAVARPRLAGVGTPIGKFTHGGAFHLTVHALDLLAAHARRRVWLKPDTERSFLFGNS 120

Query: 471 IIKSGLGRITENTPKHQGVVVLTMSDIPIGFGVASRTTAECRHADPLATIVFHQADVGEY 650
           + KS L RITENT  + GVVV++M+D+P+GFG+A+R+  +CR AD  A +V HQ+D GEY
Sbjct: 121 VPKSSLARITENTKANDGVVVMSMADVPLGFGIAARSAQDCRKADTNAVVVLHQSDAGEY 180

Query: 651 IRSEDTL 671
           +R E+ L
Sbjct: 181 LRREEEL 187


>07_03_1408 - 26353389-26355191
          Length = 600

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +3

Query: 429 VKPSAEQQFLYGHHIIKSGLGRITENTPKHQGVVVLTMSDIPIGFGVASRTTA 587
           VK SA     YG  ++  GL R   +    + VV++T     I  G+A  TTA
Sbjct: 315 VKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTA 367


>03_03_0094 + 14378953-14380728
          Length = 591

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 429 VKPSAEQQFLYGHHIIKSGLGRITENTPKHQGVVVLTMSDIPIGFGVASRTTA 587
           VK SA     YG  ++  GL R        + VV++T     I  G+A  TTA
Sbjct: 319 VKDSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTA 371


>12_01_0482 -
           3791630-3791698,3791983-3792124,3792202-3792344,
           3792833-3792958,3794307-3794444,3794540-3794622,
           3794738-3794825,3796147-3796344
          Length = 328

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 473 HQKWLGPDNRKYTETSRCGGINDVRYPDW 559
           HQ WL     +  E+SR   +  + YPDW
Sbjct: 198 HQLWLRDVMVQCNESSRVHSVRHIEYPDW 226


>06_01_0085 -
           678144-678335,678466-678639,678721-678912,679756-679911,
           680091-680158,680878-681127
          Length = 343

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 557 WLWRSFKNDGRVSTR*SFGDDCLPPG 634
           W W+ FK+     T  SFGD  +P G
Sbjct: 155 WTWKKFKSPKESDTELSFGDFTVPNG 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,112,673
Number of Sequences: 37544
Number of extensions: 393384
Number of successful extensions: 993
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)