Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E23
         (874 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein...    29   6.3  
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA...    29   6.3  
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB...    29   6.3  

>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
           protein.
          Length = 2146

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 YQVTYIAASINKNIQFYNINDCPKNVLETIGNCN 465
           Y+   +   I KN +  NIN+C  N     GNCN
Sbjct: 886 YECVCVPGIIGKNCEI-NINECDSNPCSKHGNCN 918


>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
           isoform A protein.
          Length = 2146

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 364 YQVTYIAASINKNIQFYNINDCPKNVLETIGNCN 465
           Y+   +   I KN +  NIN+C  N     GNCN
Sbjct: 886 YECVCVPGIIGKNCEI-NINECDSNPCSKHGNCN 918


>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
            isoform B protein.
          Length = 2189

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 364  YQVTYIAASINKNIQFYNINDCPKNVLETIGNCN 465
            Y+   +   I KN +  NIN+C  N     GNCN
Sbjct: 929  YECVCVPGIIGKNCEI-NINECDSNPCSKHGNCN 961


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,755,183
Number of Sequences: 53049
Number of extensions: 660144
Number of successful extensions: 1320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)