Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E23
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    31   1.4  
AF098993-3|AAC67464.2|  367|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical p...    29   4.3  

>Z69661-2|CAA93494.1|  925|Caenorhabditis elegans Hypothetical
           protein F48F7.4 protein.
          Length = 925

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 635 WMFTQNRYA*QFCIYFMTQFTNRLLFVFPFSSNSLQAQNIST-FTSIISFWHASKSIVLQ 459
           ++F Q++Y   FC  F  QF N++L      S+ L  ++    +TS    +  SK +  Q
Sbjct: 128 FIFLQSQYISVFCCVF--QFANQILL----QSDGLNLKHFKCLYTSTFLLFRCSKKLYTQ 181

Query: 458 FPMVSNTF 435
           +P  +++F
Sbjct: 182 YPACNSSF 189


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 87  SLACYTLICRLNMFQFPEQENNTL-LSETLKHFQNCTKNFV--EPPNSY 224
           S AC   +C L  F FPE E  ++ LSE    + N T + V    PN Y
Sbjct: 135 SAACGVSMCILKFFAFPETERRSIELSEEFSLYYNLTMDQVVYNGPNYY 183


>AF098993-3|AAC67464.2|  367|Caenorhabditis elegans Hypothetical
           protein T10B11.4 protein.
          Length = 367

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +1

Query: 430 PKNVLETIGNCNTILLDACQKLIMDVNVDIFCAWSEFEENGKTNSNLLVN 579
           P N+L TIG C+  L  AC  L+ + +    C+  +    G T+  +  N
Sbjct: 135 PSNLLNTIGRCDHYLCTACFGLVKNSDGTNGCSSRQCFSKGSTSKEIKKN 184


>Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical
           protein Y41E3.19 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 430 PKNVLETIGNCNTILLDACQKLIMDVNVDIFCAWSEFEENGKTN 561
           P N+L TIG C+  L  AC  L+ + +    C+  +   NG+ +
Sbjct: 132 PSNLLNTIGRCDHYLCTACYGLVKNSDGTNGCSSRQCFWNGENS 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,257,438
Number of Sequences: 27780
Number of extensions: 374121
Number of successful extensions: 961
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 961
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)