BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E21
(877 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094929-1|AAM11282.1| 204|Drosophila melanogaster RH49505p pro... 177 2e-44
AE014297-1036|AAF54447.1| 204|Drosophila melanogaster CG9471-PA... 175 5e-44
AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p pro... 38 0.024
AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA... 38 0.024
BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p pro... 33 0.52
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 33 0.52
AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p pro... 33 0.68
AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA... 33 0.68
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 31 2.8
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 31 2.8
U62004-1|AAC47282.1| 577|Drosophila melanogaster Sob protein pr... 30 4.8
BT003205-1|AAO24960.1| 578|Drosophila melanogaster RE22261p pro... 30 4.8
AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-P... 30 4.8
AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-P... 30 4.8
AE014134-634|AAF51087.1| 578|Drosophila melanogaster CG3242-PA ... 30 4.8
AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p pro... 29 6.4
AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB... 29 6.4
AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA... 29 6.4
>AY094929-1|AAM11282.1| 204|Drosophila melanogaster RH49505p
protein.
Length = 204
Score = 177 bits (430), Expect = 2e-44
Identities = 86/197 (43%), Positives = 121/197 (61%)
Frame = +2
Query: 110 GSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTD 289
G TG+ G AV+ AL+KGL V+ R +PE K KVE+VKG+V + V +EG D
Sbjct: 8 GGTGMTGECAVDHALQKGLSVKLLYRSEKTVPERFKSKVELVKGDVTNYEDVQRVIEGVD 67
Query: 290 AVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLN 469
AV + LGTRN L T++LS GT+N+I AM+ + S +S+FL +VP +F LN
Sbjct: 68 AVAVILGTRNKLEATTELSRGTENLIKAMKEAKLTKFSIVMSSFLLRPLNEVPTVFHRLN 127
Query: 470 EDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDAL 649
E+H+RM K L+WIA PPH D+P+ V E+ PGR ++K DLG F++D+L
Sbjct: 128 EEHQRMLDLTKACDLDWIAILPPHIADEPA--TAYTVLHEEAPGRLVSKYDLGKFIIDSL 185
Query: 650 SEPKYYKAVIGICNVPK 700
+P++Y+ V GI PK
Sbjct: 186 EQPEHYRKVCGIGKSPK 202
>AE014297-1036|AAF54447.1| 204|Drosophila melanogaster CG9471-PA
protein.
Length = 204
Score = 175 bits (427), Expect = 5e-44
Identities = 85/197 (43%), Positives = 121/197 (61%)
Frame = +2
Query: 110 GSTGVIGLNAVEAALKKGLEVRAFVRDPAKLPEHLKDKVEIVKGNVLEPDSVHEAVEGTD 289
G TG+ G AV+ AL+KGL V+ R +PE K KVE+VKG+V + V +EG D
Sbjct: 8 GGTGMTGECAVDHALQKGLSVKLLYRSEKTVPERFKSKVELVKGDVTNYEDVQRVIEGVD 67
Query: 290 AVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLN 469
AV + LGTRN L T++LS GT+N+I AM+ + S +S+FL +VP +F LN
Sbjct: 68 AVAVILGTRNKLEATTELSRGTENLIKAMKEAKLTKFSIVMSSFLLRPLNEVPTVFHRLN 127
Query: 470 EDHKRMFQALKDSGLNWIAAFPPHFTDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDAL 649
E+H+RM K L+WIA PPH D+P+ V ++ PGR ++K DLG F++D+L
Sbjct: 128 EEHQRMLDLTKACDLDWIAILPPHIADEPA--TAYTVLHDEAPGRLVSKYDLGKFIIDSL 185
Query: 650 SEPKYYKAVIGICNVPK 700
+P++Y+ V GI PK
Sbjct: 186 EQPEHYRKVCGIGKSPK 202
>AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p
protein.
Length = 898
Score = 37.5 bits (83), Expect = 0.024
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -2
Query: 357 LVPSDKSEVGARSFLVPR-VMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRT 181
++PS +++ ++SFL+PR ++ + S+A+ T SGS L ++ R F+ T
Sbjct: 288 ILPSLQAQPQSQSFLLPRSILASEEDRSSAAFTGSGSEAESLNEQSVVARIIADFSDIET 347
Query: 180 NARTSRPFLRAASTAFKPITPVEPKNHDLLHFKFNC 73
R+S+P + PK +D L F +C
Sbjct: 348 EQRSSQPGHNQNESQSGSNVYSSPKAYDKLIFTPHC 383
>AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA
protein.
Length = 892
Score = 37.5 bits (83), Expect = 0.024
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -2
Query: 357 LVPSDKSEVGARSFLVPR-VMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRT 181
++PS +++ ++SFL+PR ++ + S+A+ T SGS L ++ R F+ T
Sbjct: 288 ILPSLQAQPQSQSFLLPRSILASEEDRSSAAFTGSGSEAESLNEQSVVARIIADFSDIET 347
Query: 180 NARTSRPFLRAASTAFKPITPVEPKNHDLLHFKFNC 73
R+S+P + PK +D L F +C
Sbjct: 348 EQRSSQPGHNQNESQSGSNVYSSPKAYDKLIFTPHC 383
>BT022527-1|AAY54943.1| 307|Drosophila melanogaster IP07888p
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.52
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -2
Query: 297 TTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRPFLRAAS---TAFKP 127
T++SVPS + + S + S+ S S S +GS +N R+SRPFLR S TA P
Sbjct: 87 TSSSVPSLSLTSSSSAGLSSPGSSSSSSSSSTSTSGSNSN-RSSRPFLRDCSSQDTAMPP 145
Query: 126 -ITPVEPK 106
P E K
Sbjct: 146 KFDPTEVK 153
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.52
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 243 FPLTISTLSLRCSGSFAGSRTNARTSRPFLRAASTAFKPITPVEPKNHDLLHFKF 79
FP IST ++ G F T R L AST+FK +EP+ D++ FKF
Sbjct: 309 FPEMISTSNVAVYGGFCALATFDRQELKRLVIASTSFKLFLELEPQLRDII-FKF 362
>AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p
protein.
Length = 985
Score = 32.7 bits (71), Expect = 0.68
Identities = 31/99 (31%), Positives = 46/99 (46%)
Frame = -2
Query: 471 SFKLTKIGGTFSCS*NKNADKQADTVLTFFALIASIMFLVPSDKSEVGARSFLVPRVMTT 292
S L G F C + D D +LT + AS F P+D+ EVG++S + +
Sbjct: 390 SCNLENSSGLF-CDLRQPDDCTIDDILT--PVNASNSF--PADEFEVGSQSQVNESSLDK 444
Query: 291 ASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNA 175
A ST +C SGS +S++ +GSF G +A
Sbjct: 445 AKSASTETCDASGSNPATRLLSSI----NGSFVGEAIHA 479
>AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA
protein.
Length = 985
Score = 32.7 bits (71), Expect = 0.68
Identities = 31/99 (31%), Positives = 46/99 (46%)
Frame = -2
Query: 471 SFKLTKIGGTFSCS*NKNADKQADTVLTFFALIASIMFLVPSDKSEVGARSFLVPRVMTT 292
S L G F C + D D +LT + AS F P+D+ EVG++S + +
Sbjct: 390 SCNLENSSGLF-CDLRQPDDCTIDDILT--PVNASNSF--PADEFEVGSQSQVNESSLDK 444
Query: 291 ASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNA 175
A ST +C SGS +S++ +GSF G +A
Sbjct: 445 AKSASTETCDASGSNPATRLLSSI----NGSFVGEAIHA 479
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -2
Query: 243 FPLTISTLSLRCSGSFAGSRTNARTSRPFLRAASTAFKPITPVEPKNHDLLHFKF 79
FP IST ++ G T R L AST+FK +EP+ D++ FKF
Sbjct: 309 FPEMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDII-FKF 362
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 30.7 bits (66), Expect = 2.8
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -2
Query: 243 FPLTISTLSLRCSGSFAGSRTNARTSRPFLRAASTAFKPITPVEPKNHDLLHFKF 79
FP IST ++ G T R L AST+FK +EP+ D++ FKF
Sbjct: 309 FPEMISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDII-FKF 362
>U62004-1|AAC47282.1| 577|Drosophila melanogaster Sob protein
protein.
Length = 577
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2
Query: 312 VPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRP 160
+P ++ A++ +SC+ S S PLT +T S + S + + +N+ TS P
Sbjct: 208 LPSLIDIANIELKSSCSSSSSGEPPLTAATASAAATSSPSSNNSNS-TSTP 257
>BT003205-1|AAO24960.1| 578|Drosophila melanogaster RE22261p
protein.
Length = 578
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2
Query: 312 VPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRP 160
+P ++ A++ +SC+ S S PLT +T S + S + + +N+ TS P
Sbjct: 209 LPSLIDIANIELKSSCSSSSSGEPPLTAATASAAATSSPSSNNSNS-TSTP 258
>AE014298-1331|AAF46494.1| 4547|Drosophila melanogaster CG12139-PB
protein.
Length = 4547
Score = 29.9 bits (64), Expect = 4.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 232 YLDLVFKMFWEFCWVTYERSYF*AFFKSRLNSVQADH 122
++D++++ W + W Y R Y+ F+SR N H
Sbjct: 2003 HVDVMYREQWIY-WAEYNRGYWNGIFRSRPNGTDLQH 2038
>AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-PA
protein.
Length = 2059
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 577 FNNHFSAWVVCEVWRKRGDPI*AAVFQSLEHSLVVFVQIDEDRRHLFLFIK 425
++N+ +A V E +K G+ + F L H LV F I+ L++FIK
Sbjct: 556 YSNYMNAIAVREQSKKAGNSLRKFKFDLLNHLLVHFPTIESILYSLYMFIK 606
>AE014134-634|AAF51087.1| 578|Drosophila melanogaster CG3242-PA
protein.
Length = 578
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = -2
Query: 312 VPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNARTSRP 160
+P ++ A++ +SC+ S S PLT +T S + S + + +N+ TS P
Sbjct: 209 LPSLIDIANIELKSSCSSSSSGEPPLTAATASAAATSSPSSNNSNS-TSTP 258
>AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p
protein.
Length = 534
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +2
Query: 251 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 430
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 431 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 526
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
>AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB,
isoform B protein.
Length = 534
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +2
Query: 251 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 430
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 431 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 526
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
>AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA,
isoform A protein.
Length = 534
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = +2
Query: 251 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 430
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 431 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 526
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,260,107
Number of Sequences: 53049
Number of extensions: 737669
Number of successful extensions: 2407
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -