Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E17
(887 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 173 4e-44
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 52 8e-08
SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase comp... 49 1e-06
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 37 0.003
SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptida... 32 0.095
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 27 3.6
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 27 4.7
SPBC409.10 |ade7||phosphoribosylamidoimidazolesuccinocarboxamide... 26 8.2
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 26 8.2
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 8.2
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 173 bits (420), Expect = 4e-44
Identities = 84/172 (48%), Positives = 115/172 (66%), Gaps = 1/172 (0%)
Frame = +2
Query: 371 DKSSYRGLILSNRMKVLLVSDPKTEKSAAALDVNVGYLSDPDELPGLAHFCEHMLFLGTE 550
D YR + L N ++VLLV DP+T+ ++AA+DV++G S+P EL GLAHFCEH+LF+GT+
Sbjct: 20 DDREYRLIKLENDLEVLLVRDPETDNASAAIDVHIGSQSNPRELLGLAHFCEHLLFMGTK 79
Query: 551 KYPQENEYSKFLSEHGGGSNASTAMDHTTYYFDVLPPHLGRALDIFAQFFIRPLFTESAT 730
KYP ENEY K+L H G SNA TA ++T YYF+V L ALD FAQFFI PLF E
Sbjct: 80 KYPDENEYRKYLESHNGISNAYTASNNTNYYFEVSHDALYGALDRFAQFFIDPLFLEECK 139
Query: 731 SKELNAVNSEHEXNTTSNYWRLXQVNCXLADPRNPYSSSEQAK-KXPGXIPK 883
+E+ AV+SEH N S+ WR ++ L++P++ +S + G +PK
Sbjct: 140 DREIRAVDSEHCKNLQSDSWRFWRLYSVLSNPKSVFSKFNTGNIETLGDVPK 191
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 52.4 bits (120), Expect = 8e-08
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +2
Query: 506 GLAHFCEHMLFLGTEKYPQENEYSKFLSEHGGGSNASTAMDHTTYYFDVLPPH-LGRALD 682
G H EH+ F+G++KYP +KF G NA T +D+T+Y R L
Sbjct: 58 GCPHTLEHLCFMGSKKYPMNGILTKFAGRACGDINACTDVDYTSYELSAAEEDGFLRLLP 117
Query: 683 IFAQFFIRPLFTESATSKELNAVNSEHE 766
+FA + P+ ++ A E+ +N E
Sbjct: 118 VFADHILSPILSDEAFCTEVYHINGMGE 145
>SPBP23A10.15c |qcr1|mas1|mitochondrial processing peptidase complex
beta subunit Qcr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 457
Score = 48.8 bits (111), Expect = 1e-06
Identities = 31/123 (25%), Positives = 51/123 (41%)
Frame = +2
Query: 398 LSNRMKVLLVSDPKTEKSAAALDVNVGYLSDPDELPGLAHFCEHMLFLGTEKYPQENEYS 577
L N + V P + + + V+ G ++ + G AHF EH+ F GT+ Q+
Sbjct: 27 LKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRSQKALEL 86
Query: 578 KFLSEHGGGSNASTAMDHTTYYFDVLPPHLGRALDIFAQFFIRPLFTESATSKELNAVNS 757
+F G NA T+ + T YY + A+ + A + SA +E +
Sbjct: 87 EF-ENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERERQVILR 145
Query: 758 EHE 766
E E
Sbjct: 146 EQE 148
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 470 NVGYLSDPDELPGLAHFCEHMLFLGTEKYPQENEYSKFLSEH-GGGSNASTAMDHTTYYF 646
++G+ + + G+ H EH G+ KYP + + K L+ NA TA D T Y F
Sbjct: 76 SIGFQTPAENDEGIPHILEHTTLCGSNKYPVRDPFFKMLNRSLATFMNAFTASDFTFYPF 135
>SPBC18E5.12c |mas2|SPBC23G7.02c|mitochondrial processing peptidase
complex alpha subunit Mas2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 494
Score = 32.3 bits (70), Expect = 0.095
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Frame = +2
Query: 416 VLLVSDPKTEK-SAAALDVNVGYLSDPDELPGLAHFCEHMLFLGTEKYPQENEYSKFLSE 592
V V DP+ S + V G + + G++HF + + F TE+ P E L
Sbjct: 55 VTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTP-VGEMKAKLEN 113
Query: 593 HGGGSNASTAMDHTTYYFDVLPPHLGRALDIFAQFFIRPLFTE 721
GG ST+ + Y V + + A+ + P E
Sbjct: 114 LGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQE 156
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 146 FFNHH-QHSRALYYSVNSHSFRYISDFGKMAI 238
FFNH + A+Y +V +H FR I D AI
Sbjct: 407 FFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAI 438
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 542 GTEKYPQENEYSKFLSEHGGGSNASTAMDHTTYYFDVLPPHLGRALDIFAQFFIRPLFTE 721
G +K + FL + G N+++ + Y++++L P + A+ FI T+
Sbjct: 391 GVDKPENDEGLGSFLPKPQDGENSASLKERLNYFYNLLMPSRWQLEAELAERFISVGATK 450
Query: 722 SA 727
SA
Sbjct: 451 SA 452
>SPBC409.10 |ade7||phosphoribosylamidoimidazolesuccinocarboxamide
synthase Ade7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 299
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 437 KTEKSAAALDVNVGYLSDPDELPGLAHFCEHMLFLGTEKYPQENEYSKFLSEHGGGSNAS 616
KT A + G + D E F + +LF+ T++ + Y F+ E+G
Sbjct: 5 KTSLDAPFTKIATGKVRDLYEC---VEFPDDLLFVATDRI---SAYD-FIMENGIPEKGK 57
Query: 617 TAMDHTTYYFDVLPPHL 667
+ ++FDVL PH+
Sbjct: 58 VLTKISEFWFDVLKPHV 74
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 709 RTYEEL-REYVQSPAEVWGQHVK 644
+ YEEL R+Y Q E W QH K
Sbjct: 148 KVYEELARKYPQHSLESWRQHYK 170
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +2
Query: 425 VSDPKTEKSAAALDVNVGYLSDPDELPGLAHFCEHMLFLGTEKYPQENEYSKFLSEHGGG 604
+ D +TEK+ L + C H + TEK+P+ N K L++ G
Sbjct: 1635 LEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSG 1694
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,456,735
Number of Sequences: 5004
Number of extensions: 70007
Number of successful extensions: 210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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