Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E16
(896 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0080 + 587674-588510 29 0.20
01_03_0194 + 13645418-13645790,13645879-13647653 33 0.41
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 31 1.6
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.6
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 30 2.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.2
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 24 3.4
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 29 3.8
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 29 5.0
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 29 6.6
01_01_0083 + 631196-631675 29 6.6
02_05_0925 - 32768815-32769654 28 8.8
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect(2) = 0.20
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPP 828
P GG G F PPPPPP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPP 99
Score = 23.4 bits (48), Expect(2) = 0.20
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 845 PPPPPPXP 822
PPPPPP P
Sbjct: 114 PPPPPPPP 121
>01_03_0194 + 13645418-13645790,13645879-13647653
Length = 715
Score = 32.7 bits (71), Expect = 0.41
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 343 DKYKCLFQGYGCILNICMCIIKILHLFPLSGTCNTSSLRT 224
DKY LF G C+ N C++ L P+ G NTSS+ T
Sbjct: 79 DKYYNLFHGLECVDNRAFCLLLWAALLPMVG-MNTSSILT 117
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P P GGG PPPPPP P
Sbjct: 29 PIPSCGGGGGGAGPTPPPPPPPP 51
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPPXGXG 891
G GGGGGG PPPP G
Sbjct: 78 GGGGGGGGGTVMYTSPPPPYSGG 100
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPPXGXG 891
G GGGGGG PPP G G
Sbjct: 79 GGGGGGGGTVMYTSPPPPYSGGG 101
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 878 GGGGXFXXXXXPPPPPPXP 822
GGGG F PPPPP P
Sbjct: 24 GGGGGFSPTAAKPPPPPSP 42
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPP 879
G GGGGGG PPPP
Sbjct: 21 GGGGGGGGFSPTAAKPPPP 39
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P P G F PPPPPP P
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPP 574
Score = 24.6 bits (51), Expect(2) = 3.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPP 828
P P G G PPPPPP
Sbjct: 652 PPPAPGIGNKFPAPPPPPPPP 672
Score = 23.4 bits (48), Expect(2) = 3.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 845 PPPPPPXP 822
PPPPPP P
Sbjct: 712 PPPPPPPP 719
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 845 PPPPPPXPXXXK 810
PPPPPP P K
Sbjct: 534 PPPPPPPPMNRK 545
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P G G F P PPPP P
Sbjct: 517 PGFQGLAGPFYGPPYPAPPPPPP 539
>02_05_0962 +
33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPP 879
G GGGGGG PPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPP 71
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPP 879
G GGGGGG PPPP
Sbjct: 51 GGGGGGGGGMGIPPRPPPP 69
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 875 GGGXFXXXXXPPPPPPXP 822
GGG + PPPPPP P
Sbjct: 93 GGGGWVQLPPPPPPPPPP 110
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 884 PXGGGGXFXXXXXPPPPPPXP 822
P GGGG P PPPP P
Sbjct: 94 PAGGGGGGGGFNYPAPPPPNP 114
>02_05_0925 - 32768815-32769654
Length = 279
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 872 GGXFXXXXXPPPPPPXP 822
GG F PPPPPP P
Sbjct: 149 GGRFDHHPPPPPPPPPP 165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,678,176
Number of Sequences: 37544
Number of extensions: 367077
Number of successful extensions: 10879
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6199
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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