Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E16
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   0.77 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.5  
AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    23   9.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 27.1 bits (57), Expect = 0.77
 Identities = 9/18 (50%), Positives = 15/18 (83%)
 Frame = -3

Query: 474  NKTKLHKNNNYQTYLTAV 421
            ++T +H+NNN+QT+  AV
Sbjct: 1338 DETSIHRNNNFQTFPQAV 1355


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 845 PPPPPPXP 822
           PPPPPP P
Sbjct: 783 PPPPPPPP 790



 Score = 23.4 bits (48), Expect = 9.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 845 PPPPPPXP 822
           PPPPPP P
Sbjct: 784 PPPPPPPP 791


>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 376 PRPPCVATMSLTTTPD 423
           P+PP   ++ L+TTP+
Sbjct: 1   PKPPLTKSLQLSTTPE 16


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,712
Number of Sequences: 2352
Number of extensions: 11810
Number of successful extensions: 142
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)