Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E16
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 0.28
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 0.28
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 0.28
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 3.4
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 6.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 28 7.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect(2) = 0.28
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P P GG PPPPPP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
Score = 25.0 bits (52), Expect(2) = 2.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPP 828
P P GG PPPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPP 747
Score = 24.2 bits (50), Expect(2) = 0.28
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 845 PPPPPPXPXXXK 810
PPPPPP P K
Sbjct: 770 PPPPPPPPGGFK 781
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 845 PPPPPPXP 822
PPPPPP P
Sbjct: 769 PPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect(2) = 0.28
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P P GG PPPPPP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
Score = 25.0 bits (52), Expect(2) = 2.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPP 828
P P GG PPPPPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPP 747
Score = 24.2 bits (50), Expect(2) = 0.28
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 845 PPPPPPXPXXXK 810
PPPPPP P K
Sbjct: 770 PPPPPPPPGGFK 781
Score = 23.4 bits (48), Expect(2) = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 845 PPPPPPXP 822
PPPPPP P
Sbjct: 769 PPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect(2) = 0.28
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPPXP 822
P P GG PPPPPP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP 348
Score = 25.0 bits (52), Expect(2) = 2.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 890 PXPXGGGGXFXXXXXPPPPPP 828
P P GG PPPPPP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPP 330
Score = 24.2 bits (50), Expect(2) = 0.28
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 845 PPPPPPXPXXXK 810
PPPPPP P K
Sbjct: 353 PPPPPPPPGGFK 364
Score = 23.4 bits (48), Expect(2) = 2.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 845 PPPPPPXP 822
PPPPPP P
Sbjct: 352 PPPPPPPP 359
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.1 bits (57), Expect(2) = 2.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPPXGXG 891
G GGGGG PPPP G
Sbjct: 40 GGCGGGGGCGGGCAPPPPPPACG 62
Score = 21.4 bits (43), Expect(2) = 2.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 808 FXXXXGXGGGGGG 846
F G GGGGGG
Sbjct: 18 FLFPSGGGGGGGG 30
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 878 GGGGXFXXXXXPPPPPPXP 822
GGGG PPPPPP P
Sbjct: 291 GGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 878 GGGGXFXXXXXPPPPPPXP 822
GGGG PPPPPP P
Sbjct: 291 GGGGYSAPAAAPPPPPPPP 309
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPPXGXG 891
G GGGGGG PPPP G
Sbjct: 32 GCGGGGGGGGCCAPPPPPPVCGG 54
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 832 GGGGGXXXXXKXPPPPXGXG 891
GGGGG PPPP G G
Sbjct: 22 GGGGGCGCAPPPPPPPCGCG 41
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 832 GGGGGXXXXXKXPPPPXGXG 891
GGGGG PPPP G G
Sbjct: 22 GGGGGCGCAPPPPPPPCGCG 41
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 832 GGGGGXXXXXKXPPPPXGXG 891
GGGGG PPPP G G
Sbjct: 22 GGGGGCGCAPPPPPPPCGCG 41
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 884 PXGGGGXFXXXXXPPPPPPXP 822
P GGGG PPPPPP P
Sbjct: 20 PSGGGGG--CGCAPPPPPPSP 38
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 823 GXGGGGGGXXXXXKXPPPPXGXG 891
G GG GG PPPP G G
Sbjct: 199 GGSGGSGGGSGRFPPPPPPYGGG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,786,696
Number of Sequences: 27780
Number of extensions: 262840
Number of successful extensions: 3348
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1804
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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