Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E12
(992 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 161 6e-40
09_06_0213 - 21610887-21611198 161 6e-40
09_04_0227 + 15861410-15861721 161 6e-40
07_03_0825 + 21773710-21774021 161 6e-40
05_05_0150 + 22758060-22758371 161 6e-40
05_05_0128 - 22591720-22592031 161 6e-40
04_04_0926 - 29462363-29462674 161 6e-40
03_01_0134 + 1060551-1060862 161 6e-40
02_05_0333 - 28012829-28013140 161 6e-40
01_06_1262 + 35833882-35834193 161 6e-40
05_05_0130 - 22598744-22599043,22599296-22599307 130 2e-30
04_01_0619 - 8125611-8127967,8128449-8130123 30 3.3
04_01_0304 + 4136261-4136294,4136360-4136436,4136555-4136634,413... 30 3.3
>10_08_0780 - 20500344-20500655
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>09_06_0213 - 21610887-21611198
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>09_04_0227 + 15861410-15861721
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>07_03_0825 + 21773710-21774021
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>05_05_0150 + 22758060-22758371
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>05_05_0128 - 22591720-22592031
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>04_04_0926 - 29462363-29462674
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>03_01_0134 + 1060551-1060862
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>02_05_0333 - 28012829-28013140
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>01_06_1262 + 35833882-35834193
Length = 103
Score = 161 bits (392), Expect = 6e-40
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLK+FLENVIRDAVTYTEHA
Sbjct: 18 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
+RKTVTAMDVVYALKRQGRTL
Sbjct: 78 RRKTVTAMDVVYALKRQGRTL 98
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 130 bits (314), Expect = 2e-30
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +2
Query: 134 RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHA 313
RHR V R IQGI KP IRRLAR+GGVKRISGLIY+ETR VL++FL+NVI DA+TYTEHA
Sbjct: 18 RHRIVFRGYIQGIAKPVIRRLARKGGVKRISGLIYKETRGVLEIFLKNVICDAITYTEHA 77
Query: 314 KRKTVTAMDVVYALKRQGRTL 376
RKTV AMDVVYALK QGRT+
Sbjct: 78 HRKTVMAMDVVYALKLQGRTI 98
>04_01_0619 - 8125611-8127967,8128449-8130123
Length = 1343
Score = 29.9 bits (64), Expect = 3.3
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 163 SRNNEACHSKIGATRRRQTYIRPDLRGNTQRSKGFSRERYPGRGYLHRAR 312
+ NN + S+ T Q+Y R + RSK R R+PG+ + R R
Sbjct: 553 NNNNFSAASRAAVTS--QSYAAASWRSHPSRSKAARRRRWPGQAWSQRMR 600
>04_01_0304 +
4136261-4136294,4136360-4136436,4136555-4136634,
4137244-4137310,4137975-4138166,4138763-4139059
Length = 248
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = -2
Query: 229 AGYTFDAAASRQSSNGRLRYSLNIISENFPVPFRASLPQAFPAFTSDPSLLRQLSNVKP* 50
A Y FD Q S + +Y N+ S P+ A+L P + +PSL+ ++ ++P
Sbjct: 92 AQYLFDLGL--QPSRPKPQYQQNMPSPCAPLRCIATLANHAPLYAPNPSLIPRVPALRPC 149
Query: 49 SKS*GIPYS 23
K G P S
Sbjct: 150 HKPCGAPPS 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,488,235
Number of Sequences: 37544
Number of extensions: 191533
Number of successful extensions: 514
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2905255520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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