Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E11
(872 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0252 + 21867179-21867283,21868362-21868526,21868621-218687... 128 4e-30
06_03_0508 - 21607706-21608863,21608943-21609090,21609411-216095... 122 4e-28
08_02_1543 + 27783063-27783182,27784321-27784485,27784577-277846... 121 7e-28
06_03_0947 + 26248378-26248494,26248600-26248764,26248843-262489... 109 3e-24
02_05_1082 - 33976038-33978035 98 7e-21
02_05_0564 + 30003817-30005778 88 1e-17
08_02_0035 + 11453171-11455186 87 2e-17
08_02_1132 - 24530921-24532906 85 5e-17
05_01_0486 - 4047055-4049013 85 5e-17
08_01_1047 - 10616113-10616669,10616727-10616953,10617564-106176... 68 9e-12
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 62 4e-10
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878... 61 1e-09
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 58 1e-08
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 58 1e-08
02_04_0195 + 20830849-20830950,20831498-20831690,20831800-208319... 44 2e-04
11_01_0518 + 4057428-4057538,4059609-4059801,4059921-4060025,406... 41 0.001
12_01_0486 + 3854889-3855014,3855897-3856089,3856206-3856310,385... 36 0.032
08_02_1185 + 25016146-25016422,25017201-25017443,25017551-250176... 33 0.39
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 30 2.1
01_03_0034 + 11828889-11828897,11829465-11829484,11829697-118297... 30 2.8
03_04_0125 - 17487746-17487847,17488025-17488555,17488834-174891... 29 3.7
>09_06_0252 +
21867179-21867283,21868362-21868526,21868621-21868730,
21868802-21868904,21868998-21869110,21869204-21869357,
21869476-21870633
Length = 635
Score = 128 bits (310), Expect = 4e-30
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 7/183 (3%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
GFY+PGVAP +F KG + VK K+TS+ TQLPY YYSLP C P+ T V +ENLGEVL
Sbjct: 22 GFYLPGVAPTDFGKGDSLPVKVNKLTSVKTQLPYAYYSLPFCKPE--TIVDSAENLGEVL 79
Query: 395 RGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
RGDRI N+PY M E C+++C + ++++++ +IE EY V++++DNLP+
Sbjct: 80 RGDRIENSPYVFQMREPKMCQIVC-----KLTVGEKEAKELKEKIEDEYRVNMILDNLPL 134
Query: 575 ATKVINVETLERTIEQGYRLGY------MSEGKAYINNXXXXXXXXXXXSQDSY-RVVGF 733
V+ + + GY +G E K +I+N R+VGF
Sbjct: 135 VVSVLR-QDKNIAYQGGYHVGVKGQYTGSKEEKYFIHNHLSFLVKYHKDDDSELSRIVGF 193
Query: 734 EVE 742
EV+
Sbjct: 194 EVK 196
>06_03_0508 -
21607706-21608863,21608943-21609090,21609411-21609523,
21609612-21609705,21609841-21609950,21610093-21610257,
21611660-21611800
Length = 642
Score = 122 bits (294), Expect = 4e-28
Identities = 70/177 (39%), Positives = 100/177 (56%), Gaps = 3/177 (1%)
Frame = +2
Query: 218 FYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLR 397
FY+PGVAP +F+K +++VK K++S TQLPY+YY L C P+ +ENLGEVLR
Sbjct: 35 FYLPGVAPRDFQKDDELQVKVNKLSSTKTQLPYDYYFLDYCKPE--AIKNSAENLGEVLR 92
Query: 398 GDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPVA 577
GDRI N+ Y M + CK++C K P E ++ +I+ EY V++++DNLPV
Sbjct: 93 GDRIENSVYNFKMRRDETCKVVCRSKLSP-----EAAKNFKEKIDDEYRVNMILDNLPVV 147
Query: 578 TKVINVETLER-TIEQGYRLGY-MSEGKAYINN-XXXXXXXXXXXSQDSYRVVGFEV 739
E + + E GYR+GY + + K YINN + R+VGF V
Sbjct: 148 VPRQTREGSQTPSFEHGYRVGYKLKDDKYYINNHLSFKVLYHEDPNSPDARIVGFHV 204
>08_02_1543 +
27783063-27783182,27784321-27784485,27784577-27784686,
27784771-27784876,27784952-27785050,27785450-27786607
Length = 585
Score = 121 bits (292), Expect = 7e-28
Identities = 69/186 (37%), Positives = 104/186 (55%), Gaps = 7/186 (3%)
Frame = +2
Query: 218 FYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLR 397
FY+PGVAP +F+K ++VK K++S TQLPY YYSLP C P T V +ENLGEVLR
Sbjct: 28 FYLPGVAPNDFQKKDPLQVKVNKLSSTKTQLPYSYYSLPFCKP--DTIVDSAENLGEVLR 85
Query: 398 GDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPVA 577
GDRI N+PY M E C+++C S + ++++ +IE EY V++++DNLP+
Sbjct: 86 GDRIENSPYVFEMREPKMCQIVC-----KATISDKQAKELKEKIEDEYRVNMILDNLPLV 140
Query: 578 TKVINVETLERTIEQGYRLGYM-----SEGKAYI--NNXXXXXXXXXXXSQDSYRVVGFE 736
+ + + + GY +G S+ + Y N+ + D R+VGFE
Sbjct: 141 VPIARPDRDDVVFQGGYHVGVKGQYAGSKDEKYFIHNHLIFLVKYHKDENSDLSRIVGFE 200
Query: 737 VEXIQF 754
I++
Sbjct: 201 ESDIKW 206
>06_03_0947 +
26248378-26248494,26248600-26248764,26248843-26248952,
26249065-26249179,26249310-26249408,26249485-26249694,
26249802-26250965
Length = 659
Score = 109 bits (262), Expect = 3e-24
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 10/185 (5%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
GFY+PGVAP +F+K ++ VK +++SI TQLPY YYSLP C P T V +ENLGEVL
Sbjct: 26 GFYLPGVAPRDFRKKDQLAVKVNQLSSIKTQLPYSYYSLPFCRP--ATIVDSAENLGEVL 83
Query: 395 RGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
RGDRI N+ Y M E C+++C K + +D + +I+ EY +++++DNLP+
Sbjct: 84 RGDRIENSLYVFEMREPRLCQIVC--KTALTHQEAKDFRE---KIDDEYRINMILDNLPL 138
Query: 575 ATKV---INVETLERTIEQGYRLGY------MSEGKAYI-NNXXXXXXXXXXXSQDSYRV 724
+ ++ + + G +G +E K +I N+ + D R+
Sbjct: 139 VVPIRSLLDDHDAPTSYQLGVHVGIKGQYAGSNEEKHFIYNHLSFLVKYHRDENTDLARI 198
Query: 725 VGFEV 739
VGFE+
Sbjct: 199 VGFEL 203
>02_05_1082 - 33976038-33978035
Length = 665
Score = 98.3 bits (234), Expect = 7e-21
Identities = 50/119 (42%), Positives = 72/119 (60%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
GFY+PG P ++ G+ + VK +TSI T++PY YYSLP C P +G +ENLGE+L
Sbjct: 27 GFYLPGSYPHKYNPGEPLSVKVNSLTSIDTEIPYSYYSLPFCTPPDGV-KDSAENLGELL 85
Query: 395 RGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLP 571
GDRI N+PY M N LC ++ P+ + + + RI+ Y V+L++DNLP
Sbjct: 86 MGDRIENSPYRFRMHANDSDLFLC--RSPPL--AADAFNLLKKRIDEMYQVNLILDNLP 140
>02_05_0564 + 30003817-30005778
Length = 653
Score = 87.8 bits (208), Expect = 1e-17
Identities = 61/174 (35%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Frame = +2
Query: 218 FYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLR 397
FY+PG +++G++I K +TSI T+LP+ YYSLP C P+ G +ENLGE+L
Sbjct: 24 FYLPGSYMHTYRQGEEIWAKVNSLTSIETELPFSYYSLPYCHPQGG-IKKSAENLGELLM 82
Query: 398 GDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPVA 577
GD+I N+PY + N + LC P++ + D + + R Y V++++DNLPV
Sbjct: 83 GDQIDNSPYRFRVNVN-ESLYLCTTN--PLDEA--DVKLLKQRSRDLYQVNMILDNLPVR 137
Query: 578 T-KVINVETLERTIEQGYRLGYMSEG--KAYINNXXXXXXXXXXXSQDSYRVVG 730
N T++ T GY +GY EG + YI N +VVG
Sbjct: 138 RFTEQNGVTIQWT---GYPVGYTPEGSNEVYIINHLKFKVLVHRYEGGKVKVVG 188
>08_02_0035 + 11453171-11455186
Length = 671
Score = 87.0 bits (206), Expect = 2e-17
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 2/153 (1%)
Frame = +2
Query: 218 FYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLR 397
FY+PG P ++ G+ + K +TS ++LP+ YYSLP C P+ G +E+LGE+L
Sbjct: 31 FYLPGSYPHRYRPGEALAAKVNSLTSPSSKLPFPYYSLPFCAPQGGV-NRAAESLGELLL 89
Query: 398 GDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPVA 577
GDRI +PY M +N LC +P ++ + RI+ Y V+LL+D LPV
Sbjct: 90 GDRIETSPYRFSMLKNATA-FLCRTDPLP----PATADLLMFRIDDAYHVNLLLDTLPVV 144
Query: 578 TKVINVETLERTIEQ-GYRLGYMS-EGKAYINN 670
V N+ + G+ +G + +G+ Y+ N
Sbjct: 145 RYVKNLAAPGVFVRSTGFPVGVRADDGEYYVYN 177
>08_02_1132 - 24530921-24532906
Length = 661
Score = 85.4 bits (202), Expect = 5e-17
Identities = 46/119 (38%), Positives = 70/119 (58%)
Frame = +2
Query: 218 FYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLR 397
FY+PG + +G++I K +TSI T++P+ YYSLP C P+ G +ENLGE+L
Sbjct: 29 FYLPGSYMHTYSQGEEIWAKVNSLTSIETEMPFSYYSLPYCRPQGG-IKKSAENLGELLM 87
Query: 398 GDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
GD+I N+PY + N + LC K + N D++ + R Y V++++DNLPV
Sbjct: 88 GDQIDNSPYRFRVNVN-ESLYLCTTKGLNEN----DAKLLKQRTRDLYQVNMMLDNLPV 141
>05_01_0486 - 4047055-4049013
Length = 652
Score = 85.4 bits (202), Expect = 5e-17
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKS-ENLGEV 391
GFY+PG + + I K +TSI T+LP+ YYSLP C P G V KS ENLGE+
Sbjct: 24 GFYLPGTFMHTYTPNEVISAKVNSLTSIETELPFSYYSLPYCKPPEG--VKKSAENLGEI 81
Query: 392 LRGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLP 571
L GD+I N+PY + N + LC P+ + E +E + R Y V++++DNLP
Sbjct: 82 LMGDQIDNSPYRFRVNVN-ESVYLC--TTDPL--TKEQAELLKKRARDLYQVNMILDNLP 136
Query: 572 VAT-KVINVETLERTIEQGYRLGY--MSEGKAYINN 670
V N T++ T G+ +GY M + YI N
Sbjct: 137 VMRFTEQNGVTIQWT---GFPVGYNPMGSNEDYIIN 169
>08_01_1047 -
10616113-10616669,10616727-10616953,10617564-10617649,
10617949-10618080,10618867-10618959
Length = 364
Score = 68.1 bits (159), Expect = 9e-12
Identities = 37/70 (52%), Positives = 44/70 (62%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
GFY+PGVAP F K ++VK K+TSI TQLPY Y V ++NLGEVL
Sbjct: 18 GFYLPGVAPNNFDKKDPLQVKVNKLTSIKTQLPYSY-------------VDSAQNLGEVL 64
Query: 395 RGDRIVNTPY 424
RGDRI N+PY
Sbjct: 65 RGDRIENSPY 74
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 62.5 bits (145), Expect = 4e-10
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +2
Query: 281 VKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKL 460
+++ +++ Y YY LP C P + K E LGEVL GDR+V+ PYE++ E+ K+
Sbjct: 57 IELPTVYCSETYRYYDLPFCAPDHPKD--KREALGEVLNGDRLVDAPYELNFKEDRNSKV 114
Query: 461 LCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
LC + + S + K+ + +Y+ + D+LP+
Sbjct: 115 LCQK-----SLSKVEVAKLRDAVAKDYYFQMYYDDLPL 147
>08_02_1544 +
27787089-27787172,27787448-27787612,27787741-27787850,
27788360-27788513,27788643-27788937,27788996-27789798
Length = 536
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/100 (32%), Positives = 57/100 (57%)
Frame = +2
Query: 257 GQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHM 436
G ++ VK ++ SI TQ+ Y YYSLP C P N T + L ++L GDR +PY+ M
Sbjct: 29 GDEVLVKMNELMSIETQITYSYYSLPFCRPDNLT--ESAPTLWQLLHGDRQQRSPYQFEM 86
Query: 437 AENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLL 556
KC+++C + ++++++ ++E EY V+++
Sbjct: 87 RVPKKCQIVCR-----VLVGEKEAKELTEKMEDEYRVNIV 121
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +2
Query: 248 FKKGQKIEVKAVKMTSIHTQLP-YEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPY 424
++ G + + A K+ H Y Y+ LP C P+ K E LGEVL GDR+V+ PY
Sbjct: 24 YRPGDAVPLYANKVGPFHNPSETYRYFDLPFCAPEK--VKDKIEALGEVLNGDRLVDAPY 81
Query: 425 EVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLP 571
++ + K +C R+ S +D K + +Y+ + D+LP
Sbjct: 82 KLDFRVDFDAKSVCSRR-----LSKDDVVKFRHAVSKDYYFQMYYDDLP 125
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 57.6 bits (133), Expect = 1e-08
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = +2
Query: 248 FKKGQKIEVKAVKMTSIHTQLP-YEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPY 424
+K + + + A K+ H Y Y+ LP C P+ KSE LGEVL GDR+V+ PY
Sbjct: 34 YKANELVPLYANKVGPFHNPSETYRYFDLPFCSPEK--VKEKSEALGEVLNGDRLVDAPY 91
Query: 425 EVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
++ + K +C +K + E+ K + + +Y+ + D+LP+
Sbjct: 92 KLDFRVDYDSKPVCSKK-----LTKEEVAKFRNAVAKDYYFQMYYDDLPL 136
>02_04_0195 +
20830849-20830950,20831498-20831690,20831800-20831904,
20832147-20832235,20832316-20832468,20832628-20832762,
20832849-20833015,20833519-20833613,20833707-20834080,
20834177-20834599
Length = 611
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/81 (29%), Positives = 43/81 (53%)
Frame = +2
Query: 305 QLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLLCHRKNVP 484
Q Y YYSLP C P N V+K LGEVL G+ ++++ ++ ++ +C + P
Sbjct: 55 QETYNYYSLPFCHPSNNP-VHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDP 113
Query: 485 INWSVEDSEKVASRIEHEYFV 547
+ + + S+ + S E+F+
Sbjct: 114 -DKAKQLSDAIESSYWFEFFI 133
>11_01_0518 +
4057428-4057538,4059609-4059801,4059921-4060025,
4060259-4060347,4060424-4060576,4060754-4060888,
4061241-4061407,4062129-4062223,4062367-4062740,
4062903-4063176,4063806-4063822
Length = 570
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 305 QLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLLC 466
Q Y YYSLP C P +K LGEVL G+ ++++ ++ +N++ +C
Sbjct: 58 QETYNYYSLPFCQPSENP-AHKWGGLGEVLGGNELIDSQVDIKFLKNVEKGPIC 110
>12_01_0486 +
3854889-3855014,3855897-3856089,3856206-3856310,
3856541-3856629,3856720-3856872,3857047-3857181,
3857293-3857459,3858193-3858287,3858495-3858868,
3859101-3859374,3859464-3859531
Length = 592
Score = 36.3 bits (80), Expect = 0.032
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 305 QLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLLC 466
Q Y Y+SLP C P +K LGEVL G+ ++++ ++ N + +C
Sbjct: 63 QETYNYHSLPFCQPSENP-AHKWGGLGEVLGGNELIDSQIDIKFLRNEERGSIC 115
>08_02_1185 +
25016146-25016422,25017201-25017443,25017551-25017672,
25017760-25017800,25017904-25018002,25018476-25018692
Length = 332
Score = 32.7 bits (71), Expect = 0.39
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +2
Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
GF V G+A E I A +S H + Y YS+ +P +G +++S G +
Sbjct: 134 GFAVSGIANAEVPVEISISNSAASTSSTHGKEVYTDYSV-TGIPGDGRCLFRSVIHGACI 192
Query: 395 RGDR-IVNTPYEVHMAENIKCKLLCH--RKNVPINWSVE-DSEKVASRIEHEY 541
R R I N + +A+ ++ + ++ W +E D + S I H +
Sbjct: 193 RAGRPIPNEDLQRKLADELRAMVADEFVKRREESEWFIEGDFDTYVSHIRHPH 245
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 341 LPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLL 463
LPKN + + +NL ++RG R V Y V A+ I ++
Sbjct: 786 LPKNSLSIKRFQNLQSLIRGIRNVRAEYSVEPAKRISSSVV 826
>01_03_0034 +
11828889-11828897,11829465-11829484,11829697-11829739,
11831088-11831252,11832745-11832864,11834709-11834879
Length = 175
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 545 VHLLVDNLPVATKVINVETLERTIE 619
V L+ + P+ATK++N T++RTI+
Sbjct: 5 VDLIESSFPIATKILNKTTIDRTIK 29
>03_04_0125 -
17487746-17487847,17488025-17488555,17488834-17489102,
17489161-17489257,17491060-17491161,17491235-17491367,
17491589-17491681,17491756-17491844,17493578-17493700,
17496908-17497004,17497440-17497639
Length = 611
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 458 LLCHRKNVPINWSVEDS-----EKVASRIEHEYFVHLLVDNLPVATKVINVETLER 610
++C++K++P NW + S + V E E+ H+L + + V + + + L++
Sbjct: 251 IICYQKSLPQNWRIYSSVASFLQHVCDHKEEEWKRHILEEEIAVLKRQADTDRLQK 306
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,811,286
Number of Sequences: 37544
Number of extensions: 346211
Number of successful extensions: 645
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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