Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E11
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical pr...   174   6e-44
AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily a...    70   3e-12
AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    40   0.003
AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical...    29   3.3  
AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z79759-8|CAE45097.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK858.6 protein.
          Length = 619

 Score =  174 bits (424), Expect = 6e-44
 Identities = 90/192 (46%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
 Frame = +2

Query: 215 GFYVPGVAPVEFKKGQKIEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSENLGEVL 394
           GFYVPGVAPV+FK G  I+VKA+K+TS +  +P+EYYS+P C P NG   YKSENLGEV+
Sbjct: 21  GFYVPGVAPVDFKAGDVIDVKAIKLTSSNNIMPFEYYSVPFCKPANGDIQYKSENLGEVM 80

Query: 395 RGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
           RGDRIVNTPY  HM +N +C  +C  K      S E+      RI  EY  HL+VDNLPV
Sbjct: 81  RGDRIVNTPYAFHMKKNEQCVSVCSNK-----LSKENVALFKERIRQEYSAHLIVDNLPV 135

Query: 575 ATKVINVETLERTIEQGYRLGYMSE-GKAYINNXXXXXXXXXXXSQDSYRVVGFEVEXIQ 751
           AT +   ++ +   + GYRLG++ +  K ++NN           +   YRVVGFEV   +
Sbjct: 136 ATVINPAQSGDVYYDLGYRLGWIGDNAKVFLNNHLQFVVKYHQHTPGLYRVVGFEVRP-R 194

Query: 752 FLKMNXITDDTC 787
            +      D TC
Sbjct: 195 SISATKNDDGTC 206


>AF026213-6|AAB71307.1|  655|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 123 protein.
          Length = 655

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
 Frame = +2

Query: 218 FYVPGVAPVEFKKGQK------IEVKAVKMTSIHTQLPYEYYSLPLCLPKNGTFVYKSEN 379
           FY+PG+APV F + +K      I +    + S  + +PYEY+S   C           EN
Sbjct: 23  FYLPGLAPVNFCEVEKANCPSNISLYVNHLDSDRSVIPYEYHSFDFCTVNEDESPV--EN 80

Query: 380 LGEVLRGDRIVNTPYEVHMAENIKCKLLCHRKNVPINWSVEDSEK---VASRIEHEYFVH 550
           LG+VL G+RI  +PY+V   +  KC+L+C  K      S +D  K   +   +   Y  H
Sbjct: 81  LGQVLFGERIRPSPYKVAFLQEEKCRLVCDTKKY-ARGSADDLAKLRLLQRAMTLNYQHH 139

Query: 551 LLVDNLPVATKVINVETLERTIEQGYRLGYMSEGKAY 661
            +VDN+PV     N++ ++     G+ +G   + + Y
Sbjct: 140 WIVDNMPVTFCFKNLQNMD-VCTTGFPVGCFVDEQGY 175


>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 21/90 (23%), Positives = 43/90 (47%)
 Frame = +2

Query: 305 QLPYEYYSLPLCLPKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLLCHRKNVP 484
           Q  Y Y+SLP C  +     +  E +GE L G  +  +  ++    N K  ++C +K   
Sbjct: 44  QETYTYFSLPFCKGEKKEIGHYHETMGESLLGVELEFSGLDIKFRTNTKKTVVCEKK--- 100

Query: 485 INWSVEDSEKVASRIEHEYFVHLLVDNLPV 574
              +  D + +   I++ Y+  + +D++P+
Sbjct: 101 --LTETDYKTLLYAIQNSYYYQMYLDDMPI 128


>AL032637-13|CAA21615.1|  709|Caenorhabditis elegans Hypothetical
           protein Y43F8C.14 protein.
          Length = 709

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 488 NWSVEDSEKVASRIEHEYFVHLLVDNLP 571
           N S+E+S +++   EHE+ + LL+D  P
Sbjct: 648 NNSIEESREMSQGAEHEFHIELLIDQDP 675


>AF039052-2|AAF98629.1|  400|Caenorhabditis elegans Hypothetical
           protein T22D1.8 protein.
          Length = 400

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
 Frame = +2

Query: 344 PKNGTFVYKSENLGEVLRGDRIVNTPYEVHMAENIKCKLLCHRKNVPI----NWSVEDSE 511
           PK   F   S+N  E L+    V     VH+ + +  KL    K + +    N  +ED E
Sbjct: 84  PKMCVFENSSDNQLEELKIPNGVIMTQPVHLGDTLHLKLKMENKTMEVFQLSNAIIEDME 143

Query: 512 KVASRIEHEYFVHLLVDNLPV-ATKVINVETLERTIEQGY 628
           K +   E + F+ L + N  V  +K IN  T    +  GY
Sbjct: 144 KGS---EQQVFLELSIYNRYVDKSKAIN-HTKAHKVNVGY 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,686,438
Number of Sequences: 27780
Number of extensions: 358421
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)