Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E06
         (1065 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20352-1|AAC16436.1|  334|Homo sapiens malate dehydrogenase prot...    54   9e-07
D55654-1|BAA09513.1|  334|Homo sapiens cytosolic malate dehydrog...    54   9e-07
CR457405-1|CAG33686.1|  334|Homo sapiens MDH1 protein.                 54   9e-07
BC001484-1|AAH01484.1|  334|Homo sapiens malate dehydrogenase 1,...    54   9e-07
AC016734-1|AAY14893.1|  334|Homo sapiens unknown protein.              54   9e-07

>U20352-1|AAC16436.1|  334|Homo sapiens malate dehydrogenase
           protein.
          Length = 334

 Score = 54.0 bits (124), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 373 GAQQPVFLHLLDIAPMMGVLEGVVMXLADCALPL 474
           G  QP+ L LLDI PMMGVL+GV+M L DCALPL
Sbjct: 31  GKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64



 Score = 41.1 bits (92), Expect = 0.007
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 281 MAEPIRVVVTGAXGQIAYSFLXSXG 355
           M+EPIRV+VTGA GQIAYS L S G
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIG 25


>D55654-1|BAA09513.1|  334|Homo sapiens cytosolic malate
           dehydrogenase protein.
          Length = 334

 Score = 54.0 bits (124), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 373 GAQQPVFLHLLDIAPMMGVLEGVVMXLADCALPL 474
           G  QP+ L LLDI PMMGVL+GV+M L DCALPL
Sbjct: 31  GKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64



 Score = 41.1 bits (92), Expect = 0.007
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 281 MAEPIRVVVTGAXGQIAYSFLXSXG 355
           M+EPIRV+VTGA GQIAYS L S G
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIG 25


>CR457405-1|CAG33686.1|  334|Homo sapiens MDH1 protein.
          Length = 334

 Score = 54.0 bits (124), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 373 GAQQPVFLHLLDIAPMMGVLEGVVMXLADCALPL 474
           G  QP+ L LLDI PMMGVL+GV+M L DCALPL
Sbjct: 31  GKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64



 Score = 41.1 bits (92), Expect = 0.007
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 281 MAEPIRVVVTGAXGQIAYSFLXSXG 355
           M+EPIRV+VTGA GQIAYS L S G
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIG 25


>BC001484-1|AAH01484.1|  334|Homo sapiens malate dehydrogenase 1,
           NAD (soluble) protein.
          Length = 334

 Score = 54.0 bits (124), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 373 GAQQPVFLHLLDIAPMMGVLEGVVMXLADCALPL 474
           G  QP+ L LLDI PMMGVL+GV+M L DCALPL
Sbjct: 31  GKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64



 Score = 41.1 bits (92), Expect = 0.007
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 281 MAEPIRVVVTGAXGQIAYSFLXSXG 355
           M+EPIRV+VTGA GQIAYS L S G
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIG 25


>AC016734-1|AAY14893.1|  334|Homo sapiens unknown protein.
          Length = 334

 Score = 54.0 bits (124), Expect = 9e-07
 Identities = 24/34 (70%), Positives = 27/34 (79%)
 Frame = +1

Query: 373 GAQQPVFLHLLDIAPMMGVLEGVVMXLADCALPL 474
           G  QP+ L LLDI PMMGVL+GV+M L DCALPL
Sbjct: 31  GKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64



 Score = 41.1 bits (92), Expect = 0.007
 Identities = 19/25 (76%), Positives = 21/25 (84%)
 Frame = +2

Query: 281 MAEPIRVVVTGAXGQIAYSFLXSXG 355
           M+EPIRV+VTGA GQIAYS L S G
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIG 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,401,128
Number of Sequences: 237096
Number of extensions: 1459368
Number of successful extensions: 1629
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14539514738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)