Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E05
(884 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0322 - 2589074-2589121,2589214-2589296,2589414-2589492,258... 177 7e-45
01_06_1301 + 36122797-36122838,36122958-36123033,36123145-361232... 171 6e-43
09_06_0079 - 20732041-20732097,20732219-20732301,20732661-207328... 164 1e-40
03_05_1169 + 30892888-30892916,30894786-30894822,30895091-308951... 42 9e-04
01_04_0054 - 15456668-15459691 31 1.2
09_01_0088 + 1268120-1268139,1268288-1268361,1268500-1268750,126... 30 2.8
01_06_0627 - 30705604-30706977 29 3.8
04_04_0148 - 23114000-23114113,23114215-23114350,23114813-231149... 29 6.6
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 28 8.7
01_06_0192 + 27347369-27348826,27349124-27349264,27349350-273510... 28 8.7
>01_01_0322 -
2589074-2589121,2589214-2589296,2589414-2589492,
2589622-2589716,2590198-2590330,2590601-2590685,
2591040-2591163,2591297-2591372,2594305-2594319
Length = 245
Score = 177 bits (432), Expect = 7e-45
Identities = 84/126 (66%), Positives = 99/126 (78%)
Frame = +2
Query: 464 GLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATP 643
GLKVIAC+GETLE+RESG T +VV Q KA+ I D W N+V+AYEPVWAIGTGK ATP
Sbjct: 113 GLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKD-WTNVVVAYEPVWAIGTGKVATP 171
Query: 644 QQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLXP 823
QAQ+VH LR WL+ANVS V+++ RI YGGSVT AN KELA+ D+DGFLVGGASL P
Sbjct: 172 DQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELAAKPDVDGFLVGGASLKP 231
Query: 824 EXVXIV 841
E + I+
Sbjct: 232 EFIDII 237
Score = 106 bits (255), Expect = 2e-23
Identities = 49/107 (45%), Positives = 74/107 (69%), Gaps = 2/107 (1%)
Frame = +1
Query: 142 KMNGDKNQINEIVNNLKKGPLDPN--VEVIVGVPAIYLSYVKTIIPDNVEVAAQNCWKSP 315
++NG +Q+++IV L +G + VEV+V P ++L VK+ + ++VAAQNCW
Sbjct: 4 ELNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKK 63
Query: 316 KGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 456
GAFTGE+S M+ ++ + WVILGHSERR++ GE +E V +KVA+AL
Sbjct: 64 GGAFTGEVSAEMLVNLSIPWVILGHSERRSLLGESNEFVGDKVAYAL 110
>01_06_1301 +
36122797-36122838,36122958-36123033,36123145-36123268,
36123675-36123759,36124076-36124208,36124712-36124806,
36124982-36125060,36125205-36125287,36125505-36125555
Length = 255
Score = 171 bits (416), Expect = 6e-43
Identities = 83/126 (65%), Positives = 96/126 (76%)
Frame = +2
Query: 464 GLKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATP 643
G+KVIACIGETLE+RE+G T EVV Q KA+ I D W N+VLAYEPVWAIGTGK ATP
Sbjct: 122 GIKVIACIGETLEQREAGTTMEVVAAQTKAIAEKISD-WTNVVLAYEPVWAIGTGKVATP 180
Query: 644 QQAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLXP 823
QAQ+VH LR WL NVS +V+++ RI Y GSV AN KELA+ D+DGFLVGGASL P
Sbjct: 181 AQAQEVHDGLRKWLVTNVSPAVAESTRIIYRGSVNGANCKELAAKPDVDGFLVGGASLKP 240
Query: 824 EXVXIV 841
E V I+
Sbjct: 241 EFVDII 246
Score = 120 bits (289), Expect = 2e-27
Identities = 58/116 (50%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Frame = +1
Query: 115 RKFVVGGNWKMNGDKNQINEIVNNLKKG--PLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 288
RKF VGGNWK NG + +IV L + P + VEV+V P ++L VK ++ + V
Sbjct: 4 RKFFVGGNWKCNGTGEDVKKIVTVLNEAEVPSEDVVEVVVSPPFVFLPQVKGLLRPDFSV 63
Query: 289 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 456
AAQNCW GAFTGEIS M+ ++ V WVILGHSERR + GE + VA+K+A+AL
Sbjct: 64 AAQNCWVRKGGAFTGEISAEMLVNLQVPWVILGHSERRALMGESSDFVADKIAYAL 119
>09_06_0079 -
20732041-20732097,20732219-20732301,20732661-20732834,
20732927-20733059,20733226-20733310,20733527-20733650,
20733835-20733904,20734643-20734669,20734788-20734949
Length = 304
Score = 164 bits (398), Expect = 1e-40
Identities = 79/126 (62%), Positives = 98/126 (77%), Gaps = 1/126 (0%)
Frame = +2
Query: 467 LKVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQ 646
+KVIACIGE LEERE+GKT +V F+Q+KA +I + W ++V+AYEPVWAIGTGK ATP+
Sbjct: 170 VKVIACIGELLEEREAGKTFDVCFKQMKAFADSITN-WADVVIAYEPVWAIGTGKVATPE 228
Query: 647 QAQDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASL-XP 823
QAQ+VH A+R+WL NVS V+ +RI YGGSV AAN ELA +DIDGFLVGGASL P
Sbjct: 229 QAQEVHAAVRDWLKTNVSPEVASGIRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGP 288
Query: 824 EXVXIV 841
+ I+
Sbjct: 289 DFATII 294
Score = 131 bits (316), Expect = 8e-31
Identities = 56/113 (49%), Positives = 77/113 (68%)
Frame = +1
Query: 118 KFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQ 297
KF VGGNWK NG K+ ++++V L L+P+V+V+V P IY+ VK + D +EV+AQ
Sbjct: 54 KFFVGGNWKCNGTKDSVSKLVTELNAATLEPDVDVVVAPPFIYIDQVKNSLTDRIEVSAQ 113
Query: 298 NCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHAL 456
N W GA+TGEIS + D+G WVILGHSERR + GE D+ + +K A+AL
Sbjct: 114 NVWIGKGGAYTGEISAEQLVDIGCQWVILGHSERRHVIGEDDQFIGKKAAYAL 166
>03_05_1169 +
30892888-30892916,30894786-30894822,30895091-30895146,
30895192-30895306,30896063-30896127,30896218-30896299,
30896420-30896479
Length = 147
Score = 41.5 bits (93), Expect = 9e-04
Identities = 26/55 (47%), Positives = 32/55 (58%)
Frame = +2
Query: 653 QDVHHALRNWLSANVSGSVSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASL 817
Q VH LR L+ NV ++ R S TA+N KELA D++GFLV GASL
Sbjct: 78 QTVHGGLRKLLTTNVRIHMNHLCR-----SCTASNCKELAVQPDLNGFLVSGASL 127
>01_04_0054 - 15456668-15459691
Length = 1007
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -3
Query: 546 NCLKTTSSVLPDSLSSRVSPIQAMTFKPDS-KGMSNLFSNKFIFFTKNCSSFRMTKYN 376
+C + ++ VL L +RV +A+ FKPDS +G + +N+ I F+ SFR+TK N
Sbjct: 929 DCTEASTKVL---LLTRVDGYRAV-FKPDSVRGTLEIPTNENIRFSHLIPSFRLTKEN 982
>09_01_0088 +
1268120-1268139,1268288-1268361,1268500-1268750,
1268845-1269048,1269488-1269805,1269893-1269910
Length = 294
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +1
Query: 79 KVGSSNKITEMGRKFVVGG---NWKMNGDKNQINEIVNNLKKGPLDPNV 216
+V S I+E+ RKF + G NW ++ ++ + + LKKG PN+
Sbjct: 104 RVYYSKMISEVERKFAIDGRANNWILHQLDGKLRQYKSKLKKGYYKPNL 152
>01_06_0627 - 30705604-30706977
Length = 457
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +2
Query: 605 PVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYG--GSVTAANAKELA 772
PV+ +G + ++ V HA WL A + SV V + +G GS +AA KE+A
Sbjct: 223 PVYCVGPLVASGEEEGGGVRHACLAWLDAQPARSV---VFLCFGSMGSFSAAQLKEIA 277
>04_04_0148 -
23114000-23114113,23114215-23114350,23114813-23114912,
23115003-23115113,23115197-23115234,23115359-23115429,
23116998-23117176,23117272-23117389
Length = 288
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 297 LGCNFDIIRNDSLHIRQVNSRNTNNYL 217
LG NF++ RND L I V +N L
Sbjct: 104 LGLNFEVYRNDELTIEDVKRKNPRGIL 130
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +1
Query: 100 ITEMGRKFVVGGNWKMNGDKN-----QINEIVNNLKKG 198
+ ++ ++F+ GGN +NGD + I E+V L+KG
Sbjct: 709 LNKLAKRFLHGGNGAVNGDSSLPSRAYIEEVVQELQKG 746
>01_06_0192 + 27347369-27348826,27349124-27349264,27349350-27351081,
27353739-27354606,27354784-27355957
Length = 1790
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -2
Query: 790 INVFAGCKLLSISSCDRATVLNTYSVRYTPTHIGRQPVTKSMVDILSLLG 641
+ FA K + SS ++ V +T+ Y P+ I ++ + K + ILS G
Sbjct: 963 LKAFASIKQVIFSSMEKNNVPHTFWSSYLPSLIQQKGIAKRIASILSGYG 1012
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,431,827
Number of Sequences: 37544
Number of extensions: 486575
Number of successful extensions: 1165
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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