Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E04
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical pr... 109 3e-24
U28929-2|AAN63411.1| 306|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z72511-5|CAD89724.1| 314|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z78012-7|CAB01411.1| 284|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF040659-7|AAK39390.2| 153|Caenorhabditis elegans Hypothetical ... 35 0.068
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 32 0.63
Z50859-6|CAE17972.1| 106|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 31 1.1
U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical pr... 31 1.5
AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical ... 30 2.5
Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC024751-5|AAK21514.2| 220|Caenorhabditis elegans Hypothetical ... 29 3.4
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 28 7.8
>U29154-3|AAA68419.2| 283|Caenorhabditis elegans Hypothetical
protein T07F12.1 protein.
Length = 283
Score = 109 bits (261), Expect = 3e-24
Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Frame = +1
Query: 448 RWVFALRHGERVDLTYGP---WVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLT 618
R VF +RHGER D +G W+ Y D+NLP L RA G G+ DTPLT
Sbjct: 4 RRVFIIRHGERCDFAFGKSGLWINSFDSRGRYRPLDINLPRTLPKRADGWQGFAADTPLT 63
Query: 619 RLGWFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLF 792
+G+ Q++L G +R G+ I HV+ SPALRC++T G L G+ D ++ VEPGL+
Sbjct: 64 EIGYLQSKLTGRALRDNGIEINHVFCSPALRCIQTTVGLLKGMGLDKRIQFSVEPGLY 121
>U28929-2|AAN63411.1| 306|Caenorhabditis elegans Hypothetical
protein F09C12.8 protein.
Length = 306
Score = 73.3 bits (172), Expect = 2e-13
Identities = 40/113 (35%), Positives = 61/113 (53%)
Frame = +1
Query: 454 VFALRHGERVDLTYGPWVPHCFENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLGWF 633
+ +RH ERVD W+ C + Y DLN+P +L + K Y +DT +TR G
Sbjct: 48 MMVMRHSERVDDCCPGWIEKCNKEGKYEPFDLNMPTRLPIQRPLKD-YTRDTCITRSGAV 106
Query: 634 QAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLF 792
AQ++G G+ M + +Y SP+LRC++TA + + ++VEPGLF
Sbjct: 107 LAQMIGRGLLMTDNTPDVIYCSPSLRCIQTATWVRE--MSGSKALLRVEPGLF 157
>Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical
protein F53B6.7 protein.
Length = 316
Score = 56.4 bits (130), Expect = 3e-08
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 3/155 (1%)
Frame = +1
Query: 334 SRSDSILTITQGLPMNWELSKAAEEMKNNITNGTSKSRRW-VFALRHGERVDLTYGPWVP 510
+R DS +I + E A E+ + + R + A+ H E + L + WV
Sbjct: 14 NRRDSTSSIGASTYSSEEKPNAGEKFLTELAHIDQPGRELTIVAMSHAESMGLIFPNWVR 73
Query: 511 HCFENDT--YVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLGWFQAQLVGEGMRMAGVSIK 684
C+ Y D+N+P KL R Y D PLT G ++ G G+ AG+
Sbjct: 74 VCYRRGPMEYHPYDMNMPPKLVPRPPLH--YKFDPPLTERGQIVSETYGRGLLNAGIRPF 131
Query: 685 HVYASPALRCVETAQGFLDGLRADPSVKIKVEPGL 789
V+ SP ++ V+TA + GL + I ++P L
Sbjct: 132 EVFCSPDMKSVQTAAFLIKGLGLSYTT-INIDPAL 165
>Z72511-5|CAD89724.1| 314|Caenorhabditis elegans Hypothetical
protein F55A11.11 protein.
Length = 314
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Frame = +1
Query: 463 LRHGERVDLTYGP-WVPHCFENDTYVRK----DLNLPLKLAHRAGGKGGYVKDTPLTRLG 627
+R ERVD +G W+ +++ Y+ K D+N+P Y + P+T +G
Sbjct: 44 MRSAERVDRVFGSAWL----KSEKYMTKVNATDINVPKGAVLHPHF---YHFNPPITNIG 96
Query: 628 WFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGL 789
+ AQL+G +R G+ ++ SP LR ++TA + +I VEPGL
Sbjct: 97 KYSAQLIGRALRNRGIEPGVIFCSPTLRTLQTAA----AIAKSTGARILVEPGL 146
>Z78012-7|CAB01411.1| 284|Caenorhabditis elegans Hypothetical
protein C52E4.7 protein.
Length = 284
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 1/121 (0%)
Frame = +1
Query: 454 VFALRHGERVDLTYGPWVPHC-FENDTYVRKDLNLPLKLAHRAGGKGGYVKDTPLTRLGW 630
+ +R E ++ + W + + Y D+N P++L R Y D P+ G
Sbjct: 34 IIVMRCAETINEIFSDWTKRANLDENKYTPFDVNAPIELPRRTDMLKSYNLDPPINETGK 93
Query: 631 FQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGLFXX*ELA 810
++++ + ++ SP VETA + + I++EP L + A
Sbjct: 94 IASKMIARELCDRHAIPSVIFCSPDFASVETAH-LIKSYIGEKCGAIRIEPELSTLHKSA 152
Query: 811 H 813
H
Sbjct: 153 H 153
>AF040659-7|AAK39390.2| 153|Caenorhabditis elegans Hypothetical
protein ZK484.6 protein.
Length = 153
Score = 35.1 bits (77), Expect = 0.068
Identities = 24/62 (38%), Positives = 32/62 (51%)
Frame = +1
Query: 604 DTPLTRLGWFQAQLVGEGMRMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEP 783
D LT G QA VG+ A ++I+ + SP RC+ETA + + KI VEP
Sbjct: 31 DPELTLRGKQQAHEVGK--HFANMNIEAIVVSPFTRCIETAAQIV--AMMENKAKICVEP 86
Query: 784 GL 789
GL
Sbjct: 87 GL 88
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 122 TRDAP---RKLTRGPYLRQSHLETTARIVNQNRVRTPIVRWPGHILTKTPP 265
T+ AP R+ +RGP R+SH+ + R + +NRV P W + P
Sbjct: 310 TKRAPSLSRRSSRGPKSRKSHIPPSLRPLIENRVNAPSDDWSSNDFVSITP 360
>Z50859-6|CAE17972.1| 106|Caenorhabditis elegans Hypothetical
protein T26C5.5 protein.
Length = 106
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +1
Query: 157 LLKAVSLGNNCSDCKSESGSNTDSEMAGTYPHEDAADLAYKKSEETYQEWDKYWSEVMNS 336
+L A+++ +CKSE E G YPH+ + Y K ++ + + +WS V+ S
Sbjct: 14 VLSAMAMRAKHDNCKSEKLRELVLETVGIYPHQYSYQAKYLK-QQAEERFGFWWSAVIVS 72
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +1
Query: 202 SESGSNTDSEMAGTYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLPMN 381
SE S S +A TYP + + A+ + EE EW W V ++T T P N
Sbjct: 624 SEKASEPPSVVASTYPQQTNGNQAFLEQEEGDGEW--VWPTVPPLGETEVVTQTGHRPEN 681
Query: 382 WELSKAAEEMKN 417
+ + A + +
Sbjct: 682 NWVDETAPDFSH 693
>U00056-2|AAN65309.2| 187|Caenorhabditis elegans Hypothetical
protein R05H11.2 protein.
Length = 187
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/88 (27%), Positives = 41/88 (46%)
Frame = +1
Query: 190 SDCKSESGSNTDSEMAGTYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQG 369
SDC S SGS + S M + P ++ ++ Y + +E E K V DS+ I +
Sbjct: 69 SDCSSVSGSPSSSTMTSSPPPQNFFNI-YDRLKEYISEVPKD-PVVCQILLDSLAQIIEL 126
Query: 370 LPMNWELSKAAEEMKNNITNGTSKSRRW 453
+L + E++K +N + S +W
Sbjct: 127 ERQLADLEQKTEDLKMRQSNTPTTSAKW 154
>AC024808-5|AAK29931.1| 789|Caenorhabditis elegans Hypothetical
protein Y53G8AM.8 protein.
Length = 789
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 442 SRRWVFALRHGERVDLTYGPWVPHCFENDTYVRKD 546
S W+ A + R+DL P C+END Y D
Sbjct: 590 SEGWLDAFKRRHRIDLKSMTGYPVCYENDMYEEVD 624
>Z95619-3|CAB54269.1| 490|Caenorhabditis elegans Hypothetical
protein H21P03.3b protein.
Length = 490
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 303 FLVRFLGLLVCQIGGVFVRICPGHLTIGV 217
+++ +L LVC +G +F+ + GH TI V
Sbjct: 356 YILHWLSWLVCSVGVIFLVLSHGHYTIDV 384
>Z95619-2|CAB09114.1| 450|Caenorhabditis elegans Hypothetical
protein H21P03.3a protein.
Length = 450
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 303 FLVRFLGLLVCQIGGVFVRICPGHLTIGV 217
+++ +L LVC +G +F+ + GH TI V
Sbjct: 316 YILHWLSWLVCSVGVIFLVLSHGHYTIDV 344
>AC024751-5|AAK21514.2| 220|Caenorhabditis elegans Hypothetical
protein Y18H1A.4 protein.
Length = 220
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 661 RMAGVSIKHVYASPALRCVETAQGFLDGLRADPSVKIKVEPGL 789
R I H +ASP R +ETA ++ D +K+K + GL
Sbjct: 55 RFENAQISHTFASPFDRTIETASTIIE----DKGMKVKADGGL 93
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 199 KSESGSNTDSEMAGTYPHEDAADLAYKKSEETYQEWDKYWSEVMNSRSDSILTITQGLPM 378
++E + ++ H +AA +K + + + + SE + +D + T+T+ +
Sbjct: 304 EAEQAESMKEQLGEMEAHVEAALDKKRKEKFSKSPYARMISENLGKENDKMQTLTETVVE 363
Query: 379 NWELSKAAEEM-KNNITN 429
+ L K A+EM +N I N
Sbjct: 364 SSGLEKGADEMVRNEIIN 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,449,680
Number of Sequences: 27780
Number of extensions: 416457
Number of successful extensions: 1406
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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