Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E04
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    27   0.17 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    26   0.40 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     26   0.53 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   1.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.8  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    23   4.9  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   6.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   8.6  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 245 ILTKTPPIWHTRSPRKRTRNG 307
           I  + PP WHTRS  KR   G
Sbjct: 608 ITIQEPPQWHTRSTEKRVSAG 628


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 26.2 bits (55), Expect = 0.40
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 662 LIPSPTSCAWNHPSLVSGVSFTYPPLPPALCAN 564
           L+P P SC     S +   + T P LP  L  N
Sbjct: 653 LLPRPISCHTTPDSFIEAPNKTLPSLPSTLTKN 685


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 316 NIYPIPGTFPRTSCMPD--RRRLREDMSRPSHYRCSNPILIYNPSS 185
           ++YP+  T P++       R ++  D + P  YR  NP LI +  S
Sbjct: 394 SLYPMATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALIQSQPS 439


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 777 RAGLVRXLRTGTCPRESTS*RPSNCARPASTS 872
           RA  +R  RT       T  RPS+ A P+STS
Sbjct: 250 RAKSIRARRTECVTNSVTCDRPSDEAEPSSTS 281


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 113 LLCTRDAPRKLTRGPYLRQSHLETTARIVNQNRVRTPIVR 232
           LL  + +PR LT G +  +  LET     +Q + +  +++
Sbjct: 488 LLNIQKSPRTLTLGIFAEKLRLETKELFSSQQKTKNNLMK 527


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 800 KNWHMPKGID 829
           +NW  PKGID
Sbjct: 32  RNWRKPKGID 41


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 648 HQLRLEPSQSGQRGVFHVPS 589
           ++LR EP + G   + HVPS
Sbjct: 88  YKLRWEPKEYGGVKMLHVPS 107


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 648 HQLRLEPSQSGQRGVFHVPS 589
           ++LR EP + G   + HVPS
Sbjct: 88  YKLRWEPKEYGGVKMLHVPS 107


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 535 VRKDLNLPLKLAHRAGGKGGYVKDTPLTRLGWFQAQLVGE 654
           V++   +   +   A G+G  VK     + G F  Q VGE
Sbjct: 489 VQRGTKMQFCIFRTANGRGWGVKTMKTIKKGSFVTQYVGE 528


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 96  LKRVSTCCVHATHRG 140
           LK +  C  H TH+G
Sbjct: 564 LKMIQACSHHLTHKG 578


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,170
Number of Sequences: 438
Number of extensions: 5411
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)