Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_E02
         (877 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.78 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.78 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    24   1.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   7.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   9.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 515 QRQSSCSWLYFSKQSRADSSDKLMRHHK 432
           +R S C ++YF    R  ++D+L  H K
Sbjct: 668 KRWSQCMYMYFLLGFRLQANDELSAHSK 695



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 677 NAGSVNAG--YHTDRLLQGSWWWTMRTQSKYV 766
           NA SV +    HT   + G W W +   + Y+
Sbjct: 346 NASSVGSRNPIHTSSYMTGIWVWLINISATYI 377


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 515 QRQSSCSWLYFSKQSRADSSDKLMRHHK 432
           +R S C ++YF    R  ++D+L  H K
Sbjct: 668 KRWSQCMYMYFLLGFRLQANDELSAHSK 695



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 677 NAGSVNAG--YHTDRLLQGSWWWTMRTQSKYV 766
           NA SV +    HT   + G W W +   + Y+
Sbjct: 346 NASSVGSRNPIHTSSYMTGIWVWLINISATYI 377


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 848 DDSSLCVITVAEAIHEPAPTATMFF 774
           D + +CV  V + +H   P ATM F
Sbjct: 97  DKTGICVSNVFDFVHFYYPVATMSF 121


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 677 NAGSVNAG--YHTDRLLQGSWWWTMRTQSKYV 766
           NA SV +    HT   + G W W +   + Y+
Sbjct: 113 NASSVGSRNPIHTSSYMTGIWVWLINISATYI 144



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 515 QRQSSCSWLYFSKQSRADSSDKLMRHHK 432
           +R S C ++YF    R   +D+L  H K
Sbjct: 435 KRWSQCMYMYFLLGFRYLVNDELSAHSK 462


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 515 QRQSSCSWLYFSKQSRADSSDKLMRHHK 432
           +R S C ++YF    R   +D+L  H K
Sbjct: 121 KRWSQCMYMYFLLGFRYLVNDELSAHSK 148


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 330 THENVKYLPGHKLPSNVVAVP 392
           TH+  K++P +  P  ++A P
Sbjct: 418 THQFAKFMPLYSGPYKIIAKP 438


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,074
Number of Sequences: 336
Number of extensions: 3339
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)