Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_E01
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.018
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.024
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.032
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.055
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.17
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.29
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.6
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 6.3
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 6.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 8.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = +2
Query: 635 PPPXGXXPPPPPXXXXXXPXPKWXXXXXPKXXXXXPXXXXPXXXPPXPPP----PPXTXK 802
P P G P P P P P PK P P PP P P PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 803 KXXXPXP 823
P P
Sbjct: 1137 SGAPPVP 1143
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +1
Query: 574 PPPXPKXTXXPXXAXXGKKAXPPPXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXXX 753
P P P P G P P PP P P P+ A P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 754 PPXXPPXPPPPP 789
P PP PP
Sbjct: 1182 PKPAAGVPPVPP 1193
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +1
Query: 574 PPPXPKXTXXPXXAXXGKKAXPPPXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXXX 753
P P P P A G P P PP P P P+ A P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 754 PPXXPPXPPPPP 789
P P P P
Sbjct: 1163 KPSVAAPPVPAP 1174
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +2
Query: 632 PPPPXGXXPPPPPXXXXXXPXPKWXXXXXPKXXXXXPXXXXPXXXPPXPPPPPXTXKKXX 811
P P G P PPP P P P P PP P P T K
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP---TAKAPP 1238
Query: 812 XPXP 823
P P
Sbjct: 1239 VPAP 1242
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/90 (25%), Positives = 23/90 (25%), Gaps = 6/90 (6%)
Frame = +1
Query: 574 PPPXPKXTXXPXXAXXGKKAXPPPXXXXPP---PPXXXXKXPXPQVXXXAXPXXXXXXXX 744
P P P P A G P P PP P P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 745 XXXPPXXPPXPPP---PPXNXXKTXXPXPP 825
PP PPP PP P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 30.7 bits (66), Expect = 0.29
Identities = 21/83 (25%), Positives = 21/83 (25%)
Frame = +3
Query: 579 PPXKXNXXAPXGXXXXKGXPPPXGXXPPPPPXXXXXXXXPSGXXXXPXKXPXXXPXXXPP 758
PP AP P PP P P P P P PP
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAP---PIPVPSTAPP 1042
Query: 759 XXPPXXPPPPPKXXKNXXXXXPP 827
P PP PK PP
Sbjct: 1043 VPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 29.1 bits (62), Expect = 0.90
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 575 LPPXQXKPXG-PXXPXXXKRPP---PPXGXXPPPPPXXXXXXPXPKWXXXXXPKXXXXXP 742
+PP G P P + PP P G P PPP P P P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Query: 743 XXXXPXXXPPXPPPP 787
P P P
Sbjct: 1238 PVPAPSSEAPSVSTP 1252
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/69 (24%), Positives = 17/69 (24%)
Frame = +2
Query: 581 PXQXKPXGPXXPXXXKRPPPPXGXXPPPPPXXXXXXPXPKWXXXXXPKXXXXXPXXXXPX 760
P P P P P P P P P P P P P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 761 XXPPXPPPP 787
P PPP
Sbjct: 1186 AGVPPVPPP 1194
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/82 (23%), Positives = 21/82 (25%), Gaps = 2/82 (2%)
Frame = +1
Query: 577 PPXPKXTXXPXXAXXGKKAXP--PPXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXX 750
PP P + P A P P PP P P P+ A P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 751 XPPXXPPXPPPPPXNXXKTXXP 816
P P P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKP 1164
Score = 25.8 bits (54), Expect = 8.4
Identities = 21/85 (24%), Positives = 22/85 (25%), Gaps = 2/85 (2%)
Frame = +1
Query: 577 PPXPKXTXXPXXAXXGKKAXP--PPXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXX 750
PP P + P A P P P P P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAG 1187
Query: 751 XPPXXPPXPPPPPXNXXKTXXPXPP 825
PP PP PP P PP
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/73 (24%), Positives = 19/73 (26%), Gaps = 1/73 (1%)
Frame = +2
Query: 563 GXGXLPPXQXKPXGPXXPXXXKRPPPPXGXXP-PPPPXXXXXXPXPKWXXXXXPKXXXXX 739
G +PP P P PPP P P P P P P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 740 PXXXXPXXXPPXP 778
P P P P
Sbjct: 1247 PSVSTPRSSVPSP 1259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 562 PXPXPPPXGGFFSXXXSPPPPPXXPXVXGGG 470
P P PPP G + PPPPP P V GG
Sbjct: 761 PPPPPPPPG--VAGAGPPPPPPPPPAVSAGG 789
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 656 PPPPPXXXXXXPXPKWXXXXXPKXXXXXPXXXXPXXXPPXPPPPPXTXKKXXXPXPP 826
PPPPP P P P PP PPPPP P PP
Sbjct: 733 PPPPPAVIVPTPAPA---------PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +2
Query: 632 PPPPXGXXPPPPPXXXXXXPXPKWXXXXXPKXXXXXPXXXXPXXXPPXPPPP 787
PPPP P P P P P P PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA-PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 562 PXPXPPPXGGFFSXXXSPPPPPXXPXVXGGG 470
P P PPP PPPPP P V G G
Sbjct: 748 PIPVPPPA----PIMGGPPPPPPPPGVAGAG 774
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Frame = +3
Query: 657 PPPPPXXXXXXXXPSGXXXXPXKXPXXXPXXXPPXXP------PXXPPPPP 791
PPPPP P P PP P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/73 (32%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Frame = +1
Query: 574 PPPXPKXTXXPXXAXXGKKAXPP-PXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXX 750
PPP P P A PP P PPPP P P A P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP------PPPPGVAGAGP---------- 775
Query: 751 XPPXXPPXPPPPP 789
PP PPPPP
Sbjct: 776 -----PPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/63 (25%), Positives = 18/63 (28%), Gaps = 1/63 (1%)
Frame = +1
Query: 637 PPPXXXXPPPPXXXXKXPXPQ-VXXXAXPXXXXXXXXXXXPPXXPPXPPPPPXNXXKTXX 813
PPP P P P P + P PP PP PP +
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYA 794
Query: 814 PXP 822
P P
Sbjct: 795 PAP 797
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Frame = +2
Query: 581 PXQXKPXGPXXPXXXKRPPPPX--GXXPPPPP 670
P P P PPPP G PPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 578 PPXQXKPXGPXXPXXXKRPPPPXGXXPPPPP 670
PP P P P P G PPPPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 305 PXXGGPPXPXKKKKXXXGGPPP 370
P GGPP P GPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPP 777
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.032
Identities = 26/108 (24%), Positives = 30/108 (27%), Gaps = 8/108 (7%)
Frame = +1
Query: 574 PPPXPKXTXXPXXAXXGKKAXPPPXXXXPPPPXXXXKXPXP--------QVXXXAXPXXX 729
PP P + A K PPP PPPP + P + P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPP----PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRS 345
Query: 730 XXXXXXXXPPXXPPXPPPPPXNXXKTXXPXPPXXXXXXXXXXXXXPPP 873
PP PPPPP + PP PPP
Sbjct: 346 NAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 33.9 bits (74), Expect = 0.032
Identities = 29/120 (24%), Positives = 29/120 (24%)
Frame = +3
Query: 468 PPPPXTXGXXGGGGGDXXXEKNPPXGGGXGXGXXGXSPPXKXNXXAPXGXXXXKGXPPPX 647
PPPP G PP G S P P PP
Sbjct: 337 PPPPPPPRSNAAGSIPL-----PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 648 GXXPPPPPXXXXXXXXPSGXXXXPXKXPXXXPXXXPPXXPPXXPPPPPKXXKNXXXXXPP 827
PP P P G P P PP PP PP P PP
Sbjct: 392 ---PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 562 PXPXPPPXGGFFSXXXSPPPPPXXP 488
P P PPP G S + PP P P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/105 (23%), Positives = 29/105 (27%), Gaps = 6/105 (5%)
Frame = +2
Query: 530 KPPXXGGXGXRGXGXLPPXQXKPXGPXXPXXXKRPPPPXG------XXPPPPPXXXXXXP 691
KPP L + +P P P R PP G PPPPP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP------- 341
Query: 692 XPKWXXXXXPKXXXXXPXXXXPXXXPPXPPPPPXTXKKXXXPXPP 826
P+ P PPPPP + PP
Sbjct: 342 --------PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 8.4
Identities = 29/118 (24%), Positives = 30/118 (25%), Gaps = 9/118 (7%)
Frame = +3
Query: 465 APPPPXTXGXXGGGGGDXXXEKNPPXGGGXGXGXXGXSPPXKXNXXAPX----GXXXXKG 632
APPPP G + PP PP AP G
Sbjct: 360 APPPPPPRSAPSTG------RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 633 XPP---PXGXXPPPPPXXXXXXXX--PSGXXXXPXKXPXXXPXXXPPXXPPXXPPPPP 791
PP P P PP P G P P P P PP PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +3
Query: 639 PPXGXXPPPPPXXXXXXXXPSGXXXXPXKXPXXXPXXXPPXXPPXXPPPPP 791
PP PP P P P P PP P PPP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.055
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 754 PPXXPPXPPPPPXNXXKTXXPXPP 825
PP PP PPPPP + P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 571 PXXPXPXPPPXGGFFSXXXSPPPPP 497
P P P PPP G F PPPPP
Sbjct: 6 PGNPPPPPPPPG--FEPPSQPPPPP 28
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 570 PXPRXPXPPXXGGFFXXXNPPPPPP 496
P P PP GF PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 729 PXXXPXXXPPXXPPXXPPPPPKXXKNXXXXXP 824
P P PP PP PPPPP K P
Sbjct: 12 PPPPPGFEPPSQPP--PPPPPGYVKKRKNKTP 41
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 754 PPXXPPXPPPPPXNXXKTXXPXPP 825
P PP PPPP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 22.6 bits (46), Expect(2) = 6.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 638 PPXGXXPPPPP 670
PP PPPPP
Sbjct: 5 PPGNPPPPPPP 15
Score = 21.4 bits (43), Expect(2) = 6.9
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +2
Query: 767 PPXPPPPPXTXKKXXXPXPP 826
PP PPP + P PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/76 (25%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Frame = +1
Query: 577 PPXPKXTXXPXXAXXGKKAXPPPXXXXPPP-----PXXXXKXPXPQVXXXAXPXXXXXXX 741
PP P+ P + + + PPP PP P P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 742 XXXXPPXXPPXPPPPP 789
P PP PPPP
Sbjct: 190 LPSAVPPMPPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/91 (23%), Positives = 22/91 (24%)
Frame = +3
Query: 555 GXGXXGXSPPXKXNXXAPXGXXXXKGXPPPXGXXPPPPPXXXXXXXXPSGXXXXPXKXPX 734
G +PP P PP PPP P PS P P
Sbjct: 116 GKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPI--PSKAPPIPSSLPP 173
Query: 735 XXPXXXPPXXPPXXPPPPPKXXKNXXXXXPP 827
P PP P P PP
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.29
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -3
Query: 789 GGGGGXGGXXXGXXXXGXXXXXXGXXXXXHLGXGXLXXXXGG-GGGXXPXGGGGLFXXXG 613
GG GG GG G G G G GG GGG GGG G
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Query: 612 XXGPXGXFW 586
G G W
Sbjct: 265 PGGHGGPGW 273
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 5/56 (8%)
Frame = +3
Query: 636 PPPXGXXPPPPPXXXXXXXXP-----SGXXXXPXKXPXXXPXXXPPXXPPXXPPPP 788
PPP PP P SG P P P P P PPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +1
Query: 580 PXPKXTXXPXXAXXGKKAXPPPXXXXPPPPXXXXKXPXPQVXXXAXPXXXXXXXXXXXPP 759
P T P A PPP PP + P P PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPS----RNVNNLGSQVNIPPPP 276
Query: 760 XXPPXPPPPPXN 795
P PP PP N
Sbjct: 277 ATPSQPPRPPTN 288
Score = 23.8 bits (49), Expect(2) = 1.6
Identities = 11/40 (27%), Positives = 12/40 (30%)
Frame = +2
Query: 767 PPXPPPPPXTXKKXXXPXPPXXXXXXXXXXXXXXPXXXTP 886
PP PPPPP + P P TP
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTP 229
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 740 PXXXXPXXXPPXPPPPP 790
P P P PPPPP
Sbjct: 179 PATSLPSDYNPPPPPPP 195
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Frame = +2
Query: 545 GGXGXRGXGXLPPXQXKPXGPXXPXXXKRPPPPXGXXPPP--PP 670
GG PP + + P PPPP PPP PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 529 FSXXXSPPPPPXXPXVXGGG 470
FS +PPPPP P GG
Sbjct: 118 FSSSSAPPPPPILPIDSAGG 137
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 755 PXXXPPXPPPPPXTXKK 805
P PP PPPPP +K
Sbjct: 1091 PSAVPPPPPPPPAEVEK 1107
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 511 PPPPPXXPXVXGGGG 467
PPPPP P V GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.149 0.524
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,005,012
Number of Sequences: 5004
Number of extensions: 35325
Number of successful extensions: 447
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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