Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D22
         (876 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U2F2 Cluster: Putative uncharacterized protein cpt-1;...    73   1e-11
UniRef50_UPI0000583CBF Cluster: PREDICTED: similar to carnitine ...    72   2e-11
UniRef50_Q8TCG5 Cluster: Carnitine O-palmitoyltransferase I, bra...    72   2e-11
UniRef50_A7T5N0 Cluster: Predicted protein; n=3; Nematostella ve...    50   8e-05
UniRef50_Q4SBY5 Cluster: Chromosome 2 SCAF14661, whole genome sh...    34   4.1  
UniRef50_A1R5Y4 Cluster: Transcriptional regulator, AraC family;...    34   4.1  
UniRef50_A0YQB7 Cluster: Polysaccharide deacetylase; n=1; Lyngby...    34   4.1  
UniRef50_Q4SM64 Cluster: Chromosome 13 SCAF14555, whole genome s...    33   9.5  
UniRef50_Q0LEP0 Cluster: N-acetylmuramoyl-L-alanine amidase, fam...    33   9.5  

>UniRef50_Q9U2F2 Cluster: Putative uncharacterized protein cpt-1;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein cpt-1 - Caenorhabditis elegans
          Length = 779

 Score = 72.5 bits (170), Expect = 1e-11
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = +3

Query: 354 MAEAHSAVAFSFAITHDGWDVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQ 533
           MAEA SA A SFA+THDG  V++D+E+L  +W    RS+K+R  RFRN+ +NG++P +  
Sbjct: 1   MAEARSAAALSFAVTHDGVSVSYDQELLRDIWHGISRSYKRRTGRFRNDFMNGMFPANSW 60

Query: 534 SLYVLWTLLVAAHFSNFNIPFGL 602
           +L ++   +        ++ FG+
Sbjct: 61  TLGLVVGAVAVFSVIKHDLSFGI 83


>UniRef50_UPI0000583CBF Cluster: PREDICTED: similar to carnitine
           palmitoyltransferase I, partial; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to carnitine
           palmitoyltransferase I, partial - Strongylocentrotus
           purpuratus
          Length = 451

 Score = 72.1 bits (169), Expect = 2e-11
 Identities = 33/85 (38%), Positives = 51/85 (60%)
 Frame = +3

Query: 354 MAEAHSAVAFSFAITHDGWDVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQ 533
           MAEAH+AVAF F +T DG D+N + EVL  +++SG RSW  +  RF+N+++   YP    
Sbjct: 1   MAEAHAAVAFQFTVTPDGIDLNVNHEVLKAIFDSGKRSWGDKFRRFQNHMVTTTYPASPA 60

Query: 534 SLYVLWTLLVAAHFSNFNIPFGLVD 608
           S   +   +VA   +  +   G++D
Sbjct: 61  SWLAVLVAIVACILAKMDPSLGVID 85


>UniRef50_Q8TCG5 Cluster: Carnitine O-palmitoyltransferase I, brain
           isoform; n=140; Eumetazoa|Rep: Carnitine
           O-palmitoyltransferase I, brain isoform - Homo sapiens
           (Human)
          Length = 803

 Score = 72.1 bits (169), Expect = 2e-11
 Identities = 36/92 (39%), Positives = 55/92 (59%)
 Frame = +3

Query: 354 MAEAHSAVAFSFAITHDGWDVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQ 533
           MAEAH AV F  ++T DG +V     VL  ++ SG+RSWK+ L+RF N+ L GV+P    
Sbjct: 1   MAEAHQAVGFRPSLTSDGAEVELSAPVLQEIYLSGLRSWKRHLSRFWNDFLTGVFPASPL 60

Query: 534 SLYVLWTLLVAAHFSNFNIPFGLVDKMITIMP 629
           S   L++ +  A F   +   GL++K+  ++P
Sbjct: 61  SWLFLFSAIQLAWFLQLDPSLGLMEKIKELLP 92


>UniRef50_A7T5N0 Cluster: Predicted protein; n=3; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 567

 Score = 50.0 bits (114), Expect = 8e-05
 Identities = 27/87 (31%), Positives = 44/87 (50%)
 Frame = +3

Query: 354 MAEAHSAVAFSFAITHDGWDVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQ 533
           MAEA  AVA  F +T +G  ++FD      V+ +  ++ K++L  F+  +L   YP    
Sbjct: 1   MAEARLAVALQFQVTDEGIVLHFDSSAFKFVFRAITKTVKRKLKEFKTAILKRSYPATPV 60

Query: 534 SLYVLWTLLVAAHFSNFNIPFGLVDKM 614
           S  VL   L AA +S      G+++ +
Sbjct: 61  SWMVLVAALSAARYSEHETTLGVLENL 87


>UniRef50_Q4SBY5 Cluster: Chromosome 2 SCAF14661, whole genome shotgun
            sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 2
            SCAF14661, whole genome shotgun sequence - Tetraodon
            nigroviridis (Green puffer)
          Length = 1455

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = +2

Query: 332  ELIDLKHHGRSSFGCGIFLRNNSRWLGCE-FRP*SPLPSLGIGCSIMEETSCSF*EQCTE 508
            +L D       S  CG  L+  S+WL  + F    P P L +   + E   C       E
Sbjct: 887  KLSDWSAWSACSASCGSGLQMRSKWLREKAFNRGRPCPRLDLKNQVYEAVPCHSDCSQYE 946

Query: 509  WRVPRSSAVTLCAVDTTCSC 568
            WRV   S  T+ AVD   +C
Sbjct: 947  WRVESWSICTINAVDDLPAC 966


>UniRef50_A1R5Y4 Cluster: Transcriptional regulator, AraC family;
           n=1; Arthrobacter aurescens TC1|Rep: Transcriptional
           regulator, AraC family - Arthrobacter aurescens (strain
           TC1)
          Length = 328

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 468 WKKRLARFRNNVLNGVYPGHLQSLYVLWTLLVAAHFS 578
           W++RL   R  +L G Y G L  L++ W     +HFS
Sbjct: 258 WQQRLKSIRETLLTGRYEGTLTDLFLTWGFSDPSHFS 294


>UniRef50_A0YQB7 Cluster: Polysaccharide deacetylase; n=1; Lyngbya
           sp. PCC 8106|Rep: Polysaccharide deacetylase - Lyngbya
           sp. PCC 8106
          Length = 380

 Score = 34.3 bits (75), Expect = 4.1
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +3

Query: 411 DVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQSLY 542
           D  F R+ + ++W S  + W+   +  ++NVL  + PG +  L+
Sbjct: 273 DYVFTRDYVNIMWSSDSKDWRSSASSIKSNVLGSIKPGRIVLLH 316


>UniRef50_Q4SM64 Cluster: Chromosome 13 SCAF14555, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF14555, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 832

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 25/88 (28%), Positives = 36/88 (40%)
 Frame = +2

Query: 422 RP*SPLPSLGIGCSIMEETSCSF*EQCTEWRVPRSSAVTLCAVDTTCSCPFQ*LQHTIWL 601
           +P SP+PS  I   +   T  S   + +E     S   +  AV T C+ P     HT W 
Sbjct: 246 KPPSPMPS-DITSQVKLPTKPSASSEASETCQSVSECSSPTAVSTACAAPAHRQTHTHWC 304

Query: 602 S**NDNNNAKHSTWAQVVXCFLVALTMW 685
           S  +     +   W  +V  FL+ L  W
Sbjct: 305 SHYSLLPVVQRGPWVPLVLVFLLLLQDW 332


>UniRef50_Q0LEP0 Cluster: N-acetylmuramoyl-L-alanine amidase, family
           2; n=1; Herpetosiphon aurantiacus ATCC 23779|Rep:
           N-acetylmuramoyl-L-alanine amidase, family 2 -
           Herpetosiphon aurantiacus ATCC 23779
          Length = 426

 Score = 33.1 bits (72), Expect = 9.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 378 AFSFAITHDGWDVNFDREVLYLVWESGVRSWKK 476
           ++++ I  DG   ++  E  Y+ W +GVRSW +
Sbjct: 49  SYNYLIARDGKTYHYVNEKSYIAWHAGVRSWAR 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,706,194
Number of Sequences: 1657284
Number of extensions: 16933552
Number of successful extensions: 38208
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38124
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)