Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D22
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical...    73   4e-13
Z50794-2|CAA90657.2|  681|Caenorhabditis elegans Hypothetical pr...    32   0.47 
Z81088-9|CAB03126.1|  335|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    29   5.8  
Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>AL110485-26|CAB60359.3|  779|Caenorhabditis elegans Hypothetical
           protein Y46G5A.17 protein.
          Length = 779

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 33/83 (39%), Positives = 53/83 (63%)
 Frame = +3

Query: 354 MAEAHSAVAFSFAITHDGWDVNFDREVLYLVWESGVRSWKKRLARFRNNVLNGVYPGHLQ 533
           MAEA SA A SFA+THDG  V++D+E+L  +W    RS+K+R  RFRN+ +NG++P +  
Sbjct: 1   MAEARSAAALSFAVTHDGVSVSYDQELLRDIWHGISRSYKRRTGRFRNDFMNGMFPANSW 60

Query: 534 SLYVLWTLLVAAHFSNFNIPFGL 602
           +L ++   +        ++ FG+
Sbjct: 61  TLGLVVGAVAVFSVIKHDLSFGI 83


>Z50794-2|CAA90657.2|  681|Caenorhabditis elegans Hypothetical
           protein F59F5.3 protein.
          Length = 681

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 193 IPFKYLSKCLRLVYKFASSERYCYYWQYLHSFFFFYP 303
           IP +Y ++CL+ VY + SSE YC+    L  F F  P
Sbjct: 557 IPKEYPNECLKGVYYYYSSEVYCFGRLMLCLFSFMKP 593


>Z81088-9|CAB03126.1|  335|Caenorhabditis elegans Hypothetical
           protein F53F1.9 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +3

Query: 123 FLYSSLTFSKLFTSI*IILRLKLDTFQIPF-KMLKTGI*VCFFRKVLLLL--AVPAQFFF 293
           FL++ +TF   F  I I+   +  TF+ PF ++L  GI V     + + +   VPAQ +F
Sbjct: 20  FLFTIVTFILYFIEIQIVFSYRKTTFKGPFYRLLFVGIIVDIISVINMFMGQVVPAQRWF 79


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 342 SINSARNFSAPGTRVEKKKTVQVLPIVTVPF*RSKLIYQ 226
           S  SARN+SAP +    +K + ++ + +V F  S+L +Q
Sbjct: 531 SRRSARNYSAPPSASYVRKKISLVSVDSVSFGASRLSFQ 569


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -1

Query: 342 SINSARNFSAPGTRVEKKKTVQVLPIVTVPF*RSKLIYQ 226
           S  SARN+SAP +    +K + ++ + +V F  S+L +Q
Sbjct: 531 SRRSARNYSAPPSASYVRKKISLVSVDSVSFGASRLSFQ 569


>Z83231-1|CAB05749.1|  357|Caenorhabditis elegans Hypothetical
           protein F57G9.1 protein.
          Length = 357

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +1

Query: 274 YLHSFFFFYPGPWCRKVSCGINRPKTPWQKLIRLWHF 384
           ++ +F FF+P P C      I R KT ++K    W +
Sbjct: 283 FVENFLFFHPIPICLTAMFSIPRWKTEFEKSYLPWKY 319


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,022,055
Number of Sequences: 27780
Number of extensions: 417652
Number of successful extensions: 944
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)