Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_D21
(932 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 47 3e-06
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 46 1e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 45 1e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 45 2e-05
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 40 4e-04
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.002
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.008
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 35 0.019
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 33 0.076
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 1.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.9
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 3.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.0
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 6.6
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 26 8.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 8.7
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 8.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 47.2 bits (107), Expect = 3e-06
Identities = 32/129 (24%), Positives = 36/129 (27%)
Frame = +3
Query: 480 KKXPPPPPXXGAXXKXPPPLXXTPPLFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGX 659
KK PPPPP + PP+ G + PPPP P G
Sbjct: 308 KKRPPPPPPPSRRNRGKPPI--------GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS 359
Query: 660 XPPPPKXXAPPPXXXTPPPPPPXXXGXPPPXGXAXXPXXXXPXXXXXXXXPPPRXXPXXX 839
PPPP + P PPP PP P P P
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 840 PRPXXPXXP 866
P P P
Sbjct: 420 PPSLPPSAP 428
Score = 41.9 bits (94), Expect = 1e-04
Identities = 37/126 (29%), Positives = 37/126 (29%), Gaps = 18/126 (14%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXXPXGGXXPPPPKXXR---------PPPXXLXPPPPPP---PXXG 736
PPPP G PPPP R PP PPPPPP P G
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 737 XPPPP-----GXXXXPTKXXPXXG-XXPXXPPXPXXPPXXPPPXPTXXTPPXPXGAGXXX 898
PPP P G P PP PP PT P P A
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT--PPSLPPSAPPSL 431
Query: 899 XXXPPP 916
PP
Sbjct: 432 PPSAPP 437
Score = 40.3 bits (90), Expect = 4e-04
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXP 841
P PP P L P PP G P P P P PP P P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 842 P-PXPTXXTP 868
P P P P
Sbjct: 478 PAPAPAPAAP 487
Score = 39.9 bits (89), Expect = 5e-04
Identities = 26/81 (32%), Positives = 26/81 (32%)
Frame = +2
Query: 644 PXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPX 823
P G PPP R PP PPP G P P P P P
Sbjct: 370 PSTGRQPPPLSSSR---AVSNPPAPPPAIPGRSAP----ALPPLGNASRTSTPPVPTPPS 422
Query: 824 XPPXXPPPXPTXXTPPXPXGA 886
PP PP P P P GA
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGA 443
Score = 39.5 bits (88), Expect = 7e-04
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXXPXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPT 772
PP P G P G PP PP PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL---PPSAPPSLPPSAPPSLPMGAP 444
Query: 773 KXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPP 871
P P PP P P PP P PP
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 36.7 bits (81), Expect = 0.005
Identities = 35/144 (24%), Positives = 37/144 (25%), Gaps = 16/144 (11%)
Frame = +3
Query: 528 PPPLXXTPPLFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGXXPPPPKXXA------- 686
PPP + PPPP G PPPP +
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 687 -PPPXXXTPPPPPPXXXGXPPPXGXAXXPXXXXPXXXXXXXXPPP---RXXPXXXP---- 842
PP PPPPPP P G P PP R P P
Sbjct: 353 LPPQGRSAPPPPPPR---SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNA 409
Query: 843 -RPXXPXXPXPPQXGRXXXXRXPP 911
R P P PP PP
Sbjct: 410 SRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 34.3 bits (75), Expect = 0.025
Identities = 41/180 (22%), Positives = 43/180 (23%), Gaps = 10/180 (5%)
Frame = +2
Query: 239 KPPXXPPPPPPXXXXGXPXKXGVXXKKKXPXPKKXXPQXPXXXXXXPLFLKXXXKXXXXP 418
+PP PPPPP G P P P P PL + P
Sbjct: 310 RPP--PPPPPSRRNRGKPPIGNGSSNSSLPPPPP--PPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 419 PRGXLXPXXXPXXKXFXGXKXKXPPPPPXXGGXXKXXXXXXXXXXXFXRGPXXXXNXXPP 598
PR P P PPP G P PP
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 599 ----------PPXXXXGGGXXXXXXPXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPP 748
PP G P PP P P L P P PP P P
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM-PAAPPLPPAAPAPPPAPAPAP 484
Score = 33.5 bits (73), Expect = 0.044
Identities = 25/98 (25%), Positives = 26/98 (26%), Gaps = 1/98 (1%)
Frame = +1
Query: 247 PXXPPPPPXXXXGXPPKXGGSXKKKXXTPQKKXXXXXXFXXXXXPFFKKXXKXXXXPPPG 426
P PPPP G PP GS P P + PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSN---AAGSIPLPPQGRSAPPPPPPR 367
Query: 427 GXTPPXXTPXKKXXGGXXKXPP-PPPLXXGRXKKXPPP 537
P PP PPP GR PP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 33.5 bits (73), Expect = 0.044
Identities = 26/109 (23%), Positives = 26/109 (23%)
Frame = +3
Query: 591 PPPPXXXXXGGXXXSXXXPXGGXXPPPPKXXAPPPXXXTPPPPPPXXXGXPPPXGXAXXP 770
PPPP G PPPP P PP PPP A
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 771 XXXXPXXXXXXXXPPPRXXPXXXPRPXXPXXPXPPQXGRXXXXRXPPXP 917
P P P P P P G PP P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPAL---PPLGNASRTSTPPVP 418
Score = 30.3 bits (65), Expect = 0.41
Identities = 29/119 (24%), Positives = 31/119 (26%), Gaps = 11/119 (9%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXXPXGGXXPPPPKXXRPPPXXLXPPPPPPP-----------XXGX 739
P PP P P P P PP PPP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 740 PPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXPXGAGXXXXXXPPP 916
PPPP + P G P PP PP + P P G PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP--PPPPPPRSNAAGSIPLPP-QGRSAPPPPPP 366
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +2
Query: 686 PPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXT 865
PP PP P P PP P P PP P P P +
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPP---PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 866 PPXP 877
PP P
Sbjct: 290 PPLP 293
Score = 29.5 bits (63), Expect = 0.71
Identities = 36/154 (23%), Positives = 36/154 (23%), Gaps = 7/154 (4%)
Frame = +2
Query: 488 PPPPPXXGGXXKXXXXXXXXXXXFXRGPXXXXNXXPPPPXXXXGGGXXXXXXPXGGXXPP 667
P PPP G P PP P PP
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP--SSRVSAAALAANKKRPP 312
Query: 668 PPKXXRPPPXXLXPPPPP----PPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPX---PXX 826
PP PPP PP PPPP P G P P P
Sbjct: 313 PP----PPPSRRNRGKPPIGNGSSNSSLPPPP-----PPPRSNAAGSIPLPPQGRSAPPP 363
Query: 827 PPXXPPPXPTXXTPPXPXGAGXXXXXXPPPXKXG 928
PP P PP PPP G
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +1
Query: 433 TPPXXTPXKKXXGGXXKXPP--PPPLXXGRXKKXPPPSXXP--PPFXXG 567
TPP TP PP PP L G P P P PP G
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 45.6 bits (103), Expect = 1e-05
Identities = 25/72 (34%), Positives = 25/72 (34%)
Frame = +2
Query: 701 LXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXPX 880
L PPPPPP P P P G P PP P PPP P PP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPPAV 785
Query: 881 GAGXXXXXXPPP 916
AG P P
Sbjct: 786 SAGGSRYYAPAP 797
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/54 (40%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLX-PPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXP 820
PPPP P P P PPP P G PPPP P G P PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP----PPPPGVAGAGPPPPPPPPP 783
Score = 37.9 bits (84), Expect = 0.002
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = +2
Query: 740 PPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXPXGAGXXXXXXPPPX 919
PPPP PT P P PP P PPP P PP GAG PPP
Sbjct: 733 PPPPPAVIVPT---PAPAPIPVPPPAPIM--GGPPPPPP---PPGVAGAGPPPPPPPPPA 784
Query: 920 KXGG 931
G
Sbjct: 785 VSAG 788
Score = 33.9 bits (74), Expect = 0.033
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXXPXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXP 769
PPPP P PPP PP PPPPPP G PPP P
Sbjct: 732 PPPPPPAV---IVPTPAPAPIPVPPPAPIMGGPP----PPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.076
Identities = 20/58 (34%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Frame = +1
Query: 388 KKXXKXXXXPPPGGXTP-PXXTPXKKXXGGXXKX-PPPPPLXXGRXKKXPPPSXXPPP 555
K K PPP P P P PPPPP G PPP PPP
Sbjct: 726 KLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.10
Identities = 25/73 (34%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 480 KKXPPPPPXXGAXXKXPPPLXXTPPL-FXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGG 656
K PPPPP P P+ PP GG PPPP G G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGG------PPPPPPPPGVAG---------AG 774
Query: 657 XXPPPPKXXAPPP 695
PPPP PPP
Sbjct: 775 PPPPPP----PPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 651 GGXXPPPPKXXAPPPXXXTPPPPPP 725
GG PPPP PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Frame = +1
Query: 415 PPP----GGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXK-KXPPPSXXPPP 555
PPP GG PP P G PPPP + G + P P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 489 PPPPPXXGAXXKXPPPLXXTPPLFXGG 569
PPPPP G PPP PP G
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 489 PPPPPXXGAXXKXPPPLXXTPPLFXGG 569
PPPPP A PPP P + GG
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 246 PXXPPPPPXXXXXGPP 293
P PPPPP GPP
Sbjct: 761 PPPPPPPPGVAGAGPP 776
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 6/32 (18%)
Frame = +1
Query: 706 PPPPPPPXXG------XAPPPXGXPXPHXXXT 783
PPPPPPP AP P P P T
Sbjct: 777 PPPPPPPAVSAGGSRYYAPAPQAEPEPKIDET 808
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 45.2 bits (102), Expect = 1e-05
Identities = 30/101 (29%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXPPPPKXXRP--PPXXLXPPPPPPPXXGXPPPPGXXXXPT 772
PP P G P P P P PP P P G PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 773 KXXPXXGXXPXXPPXPXXPPXXPP------PXPTXXTPPXP 877
P G P PP P P P PT PP P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 44.8 bits (101), Expect = 2e-05
Identities = 27/94 (28%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXPPPPKXXRPP-PXXLXPPPPPPPXXGXPPPPGXXXXPTK 775
PP P G P P PP P PP P P PP P P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 776 XXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXP 877
P P P PP P P PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPV---PKPAAGVPPVP 1192
Score = 43.2 bits (97), Expect = 5e-05
Identities = 29/94 (30%), Positives = 30/94 (31%), Gaps = 4/94 (4%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXP-PPPKXXRPP-PXXLXPPPPPPPXXGXPPPPGXXXXPT 772
PP P G P P P PP P PP P P G PP P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 773 KXXPXXGXXPXXPPXPXXPPXXPP--PXPTXXTP 868
P G P P PP P P+ TP
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 42.7 bits (96), Expect = 7e-05
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXP-PPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTK 775
PP P P P P P P PP P G P P P+
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 776 XXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXP 877
P PP P P P P+ PP P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/100 (27%), Positives = 29/100 (29%), Gaps = 7/100 (7%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXPPPPKXXRP-PPXXLXPPPPPPPXXGXPPPPGXXXXPTK 775
PP G P P P P + PP P P P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 776 XXPXXGXXPXXPPXPXXPPXXPP------PXPTXXTPPXP 877
P G P P PP PP P P+ PP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP 1211
Score = 41.5 bits (93), Expect = 2e-04
Identities = 26/84 (30%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +2
Query: 665 PPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPP 844
P P P P PP P G PP P P+ P PP P PP
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVP----KPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 845 -PXPTXXTPPXPXGAGXXXXXXPP 913
P P+ PP P A PP
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 41.1 bits (92), Expect = 2e-04
Identities = 34/130 (26%), Positives = 37/130 (28%), Gaps = 3/130 (2%)
Frame = +3
Query: 492 PPPPXXGAXXKXPPPLXXTPPLFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGXXPPP 671
PP P P P PP+ PP P + P G P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPV-----PVPSGAPPVPKPSVAAPPVPA---PSGAPPVPK 1163
Query: 672 PKXXAPP---PXXXTPPPPPPXXXGXPPPXGXAXXPXXXXPXXXXXXXXPPPRXXPXXXP 842
P APP P PP P P G PP + P P PP P P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKP-AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 843 RPXXPXXPXP 872
P P P
Sbjct: 1223 SAGLPPVPVP 1232
Score = 40.7 bits (91), Expect = 3e-04
Identities = 26/94 (27%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXPPPPKXXRP-PPXXLXPPPPPPPXXGXPPPPGXXXXPTK 775
PP G P P P P + PP P P G PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP----KPAA 1186
Query: 776 XXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXP 877
P PP P PP P PP P
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 39.5 bits (88), Expect = 7e-04
Identities = 29/105 (27%), Positives = 29/105 (27%), Gaps = 10/105 (9%)
Frame = +2
Query: 599 PPXXXXGGGXXXXXXPXGGXXPPPPKXXRPP-PXXLXPPPPPPPXXGXPPPPGXXXX-PT 772
PP P G P P PP P PP P P PP P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 773 KXXPXXGXXPXXPPXPXXP--------PXXPPPXPTXXTPPXPXG 883
P G P PP P P PPP P G
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/129 (27%), Positives = 36/129 (27%), Gaps = 7/129 (5%)
Frame = +3
Query: 492 PPPPXXGAXXKXPPPLXXTPPLFXGGHXXXXTXPP---PPXXXXXGGXXXSXXXPXGGXX 662
PP P P P PP+ P PP G P G
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP-VPKPAAGVP 1189
Query: 663 PPPPKXXAPP---PXXXTPPPPPPXXXGXPPPXGXAXXPXXXXPXXXXXXXXPPPRXXP- 830
P PP APP P PP PPP P P A P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPP-STAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 831 XXXPRPXXP 857
PR P
Sbjct: 1249 VSTPRSSVP 1257
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/123 (25%), Positives = 34/123 (27%), Gaps = 9/123 (7%)
Frame = +2
Query: 569 PXXXXNXXPPPPXXXXGGGXXXXXXPX-GGXXP--PPPKXXRPPPXXLXPPPPPPPXXGX 739
P PP P G P P P P P P PP P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 740 PPPP------GXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXPXGAGXXXX 901
PP P P+ P PP P P P P+ PP P +G
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 902 XXP 910
P
Sbjct: 1162 PKP 1164
Score = 37.5 bits (83), Expect = 0.003
Identities = 46/214 (21%), Positives = 50/214 (23%), Gaps = 2/214 (0%)
Frame = +2
Query: 242 PPXXPPPPPPXXXXGXPX-KXGVXXKKKXPXPKKXXPQXPXXXXXXPLFLKXXXKXXXXP 418
PP PPP P P + P K P K K P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Query: 419 -PRGXLXPXXXPXXKXFXGXKXKXPPPPPXXGGXXKXXXXXXXXXXXFXRGPXXXXNXXP 595
P P P PP P G P + P
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP--SGAP 1083
Query: 596 PPPXXXXGGGXXXXXXPXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTK 775
P P G P P P PP PP P PP P+
Sbjct: 1084 PVPAP---SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP--VPVPSG 1138
Query: 776 XXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXP 877
P PP P P P P+ PP P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 35.5 bits (78), Expect = 0.011
Identities = 50/233 (21%), Positives = 54/233 (23%), Gaps = 13/233 (5%)
Frame = +3
Query: 213 KKKXGGEXXNPPXXPPPPPXXXXXGPPXKXGFXKKKKXHXP-----KKXXPXXPXXXXXX 377
+K G PP PPP P P + K H P K
Sbjct: 956 RKASGPRPAAPPSIPPPLPVSNILSSPTS----EPPKDHPPSAPLSKPVSTSPAAPLARV 1011
Query: 378 PFF*KXXXXSXXXP-PGGXYXPXXXPXKKXFXGXXKKXPPPPPXXGAXXKXPPPLXXTPP 554
P K + P P P P PP P PPP+
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 555 LFXGGHXXXXTXPPP-----PXXXXXGGXXXSXXXPXGGXXPPPPKXXAPP-PXXXTPPP 716
P P P P P P APP P P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Query: 717 PPPXXXGXPP-PXGXAXXPXXXXPXXXXXXXXPPPRXXPXXXPRPXXPXXPXP 872
P P G PP P P P P P P P P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 35.1 bits (77), Expect = 0.014
Identities = 24/82 (29%), Positives = 26/82 (31%)
Frame = +2
Query: 668 PPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPP 847
PPK PP L P P P +K P PP P P P
Sbjct: 986 PPKD-HPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Query: 848 XPTXXTPPXPXGAGXXXXXXPP 913
PT TPP P + PP
Sbjct: 1045 IPT-STPPVPKSSSGAPSAPPP 1065
Score = 35.1 bits (77), Expect = 0.014
Identities = 31/132 (23%), Positives = 33/132 (25%), Gaps = 4/132 (3%)
Frame = +3
Query: 489 PPPPPXXGAXXKXPPPLXXTP-PLFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGXXP 665
PP P GA P + P P+ G P G
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 666 PPPKXXAPP---PXXXTPPPPPPXXXGXPPPXGXAXXPXXXXPXXXXXXXXPPPRXXPXX 836
P P PP P PP PPP P P P P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPP-SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Query: 837 XPRPXXPXXPXP 872
P P P P
Sbjct: 1231 VPTAKAPPVPAP 1242
Score = 33.5 bits (73), Expect = 0.044
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXP 841
P P PP L PP P PP P P P P P
Sbjct: 1004 PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Query: 842 PPXPTXXTP----PXPXGA 886
PP P + P P GA
Sbjct: 1064 PPVPAPSSEIPSIPAPSGA 1082
Score = 32.7 bits (71), Expect = 0.076
Identities = 24/86 (27%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Frame = +2
Query: 662 PPPPKXX-RPPPXXLXPP--PPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPP 832
PP PK + PP L PP P PP P P G PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 833 XXPPPXPTXXTPPXPXGAGXXXXXXP 910
P PP P +G P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 31.9 bits (69), Expect = 0.13
Identities = 34/141 (24%), Positives = 36/141 (25%), Gaps = 17/141 (12%)
Frame = +1
Query: 214 KKKXGGKXXTPPXXPPPPPXXXXGXPPKXGGSXKKKXXTPQKKXXXXXXF--XXXXXPFF 387
+K G + PP PPP P P P K P
Sbjct: 956 RKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVP 1015
Query: 388 KKXXKXXXXPPPGGXTPPXXT--------------PXKKXXGGXXKXPPPPPLXXGRXKK 525
K K P P PP P K G PPP P
Sbjct: 1016 KLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPS 1075
Query: 526 XPPPSXXPP-PFXXGATPFXK 585
P PS PP P G P K
Sbjct: 1076 IPAPSGAPPVPAPSGIPPVPK 1096
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 44.8 bits (101), Expect = 2e-05
Identities = 29/72 (40%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 876 GXGGVXXVGXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGG-GGXPXXGGGGGGGXX 700
G GG G G GG G G G +G G PGG GG P GG GGG
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP---GGFGGGLG 252
Query: 699 XXGGGRXXLGGG 664
GGG GGG
Sbjct: 253 GFGGGPGGFGGG 264
Score = 41.9 bits (94), Expect = 1e-04
Identities = 29/84 (34%), Positives = 30/84 (35%)
Frame = -3
Query: 912 GGXXXXXXPAPXGXGGVXXVGXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXP 733
GG P G GG G GG G GG G + G PGG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 732 XXGGGGGGGXXXXGGGRXXLGGGG 661
GG GGG GGG GG G
Sbjct: 251 L--GGFGGGPGGFGGGPGGHGGPG 272
Score = 39.9 bits (89), Expect = 5e-04
Identities = 32/87 (36%), Positives = 32/87 (36%)
Frame = -3
Query: 747 GGGXPXXGGGGGGGXXXXGGGRXXLGGGGXXPPXGXXXXFXPPPXXXXGGGGXKFXKXXG 568
GGG GGG GG GG G GG G F P GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF---GGG 243
Query: 567 PLXKGGGXX*GGGGFFXXPPXXGGGGG 487
P GG G GGF P GGG G
Sbjct: 244 P----GGFGGGLGGFGGGPGGFGGGPG 266
Score = 37.1 bits (82), Expect = 0.004
Identities = 30/85 (35%), Positives = 30/85 (35%), Gaps = 1/85 (1%)
Frame = -3
Query: 843 GGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGG-GGGXXXXGGGRXXLGG 667
G GG G GG G P G G GG G G GG GGG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPP-GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF-G 241
Query: 666 GGXXPPXGXXXXFXPPPXXXXGGGG 592
GG G F P GG G
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 36.7 bits (81), Expect = 0.005
Identities = 27/78 (34%), Positives = 27/78 (34%)
Frame = -3
Query: 693 GGGRXXLGGGGXXPPXGXXXXFXPPPXXXXGGGGXKFXKXXGPLXKGGGXX*GGGGFFXX 514
GGG GGG PP G GG G G GG G GGF
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG---FGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 513 PPXXGGGGGXFXXXPXXF 460
P GGG G F P F
Sbjct: 244 PGGFGGGLGGFGGGPGGF 261
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/71 (36%), Positives = 27/71 (38%)
Frame = -3
Query: 876 GXGGVXXVGXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGGGGXXX 697
G G G GGG G G GG G +G G GG P GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFG-GFGGEGHHHGGHGGFGGGP---GGFEGGPGG 239
Query: 696 XGGGRXXLGGG 664
GGG GGG
Sbjct: 240 FGGGPGGFGGG 250
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 40.3 bits (90), Expect = 4e-04
Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Frame = +2
Query: 644 PXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPX 823
P PP P+ PP P P PP P P P+K P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP----PSPASAPPIPSKAPPIPSSLP-PPAQPA 178
Query: 824 XPPXXPPPXPTXXT--PPXP 877
P PP P+ + PP P
Sbjct: 179 APVKSPPSAPSLPSAVPPMP 198
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +2
Query: 644 PXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPX 823
P PP P PP PPP P P+ P G P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESP 236
Query: 824 XPPXXPPPXPTXXTPPXP 877
P P P+ PP P
Sbjct: 237 KFPNRGPSIPSASVPPVP 254
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/95 (27%), Positives = 29/95 (30%), Gaps = 5/95 (5%)
Frame = +2
Query: 644 PXGGXXPP---PPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPP 814
P PP PP+ PPP PP P PP P P + P P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSK---APPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 815 XPXXPPXXPP--PXPTXXTPPXPXGAGXXXXXXPP 913
P P PP P P P + PP
Sbjct: 190 LPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 33.1 bits (72), Expect = 0.058
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +2
Query: 719 PPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPPXPXGA 886
PP P P PT P P P P PP P+ PP A
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Score = 29.5 bits (63), Expect = 0.71
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +2
Query: 767 PTKXXPXXGXXPXXPPXPXXP-PXXPPPXPTXXTPPXPXGAGXXXXXXPPP 916
P+ P PP P P PPP P PP P A PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPA-SAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 8/81 (9%)
Frame = +3
Query: 531 PPLXXTPPLFXGGHXXXXTXPP----PPXXXXXGGXXXSXXXPXGGXXPPPPKXXAP--- 689
PP PP + PP PP S P PPP + AP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 690 PPXXXT-PPPPPPXXXGXPPP 749
PP + P PP PPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
Score = 27.9 bits (59), Expect = 2.2
Identities = 24/96 (25%), Positives = 24/96 (25%), Gaps = 4/96 (4%)
Frame = +3
Query: 600 PXXXXXGGXXXSXXXPXGGXXPPPPKXXAPPPXXXTPPP-PPPXXXGXPP-PXGXAXXPX 773
P G S P P P PP P PPP PP P P
Sbjct: 110 PKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPS 169
Query: 774 XXXPXXXXXXXXPPPRXXPXXXPR--PXXPXXPXPP 875
P P P P P P PP
Sbjct: 170 SLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 686 PPPXXLXPPPPPPPXXGXPPPP 751
PPP PPP P P P PP
Sbjct: 5 PPP----PPPAPAPAAAAPAPP 22
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 38.7 bits (86), Expect = 0.001
Identities = 34/123 (27%), Positives = 34/123 (27%), Gaps = 13/123 (10%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXX---PXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPP---- 751
PPPP G G PPPP P PP P PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 752 -GXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXT-----PPXPXGAGXXXXXXPP 913
G P G PP P PP P PP P PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
Query: 914 PXK 922
P K
Sbjct: 341 PFK 343
Score = 37.5 bits (83), Expect = 0.003
Identities = 33/120 (27%), Positives = 33/120 (27%), Gaps = 12/120 (10%)
Frame = +2
Query: 593 PPPPXXXXGGGXXXXXX---PXGGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPPP---- 751
PPPP G G PPPP P PP P PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 752 -GXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTP----PXPXGAGXXXXXXPPP 916
G P G PP P PP P P P P PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/98 (28%), Positives = 29/98 (29%), Gaps = 9/98 (9%)
Frame = +2
Query: 650 GGXXPPPPKXXRPPPXXLXPPPPPPPXXGXPPP-----PGXXXXPTKXXPXXGXXPXXPP 814
G PPPP +P PP P PPP PG P G PP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Query: 815 XPXXPPXXPPPXPTXXTP----PXPXGAGXXXXXXPPP 916
P PP P P P P PPP
Sbjct: 264 MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 255
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 415 PPPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPSXXPPP 555
PPP P P + PPPP+ + PPP P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/72 (31%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = +2
Query: 665 PPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPP-XXP 841
PP + P + P PPPP PPPP PP P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSA-----------------PPMPAGPPSAPP 1732
Query: 842 PPXPTXXTPPXP 877
PP P P P
Sbjct: 1733 PPLPASSAPSVP 1744
Score = 34.7 bits (76), Expect = 0.019
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPPPP 751
PPPP PPP P P PP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP--SAPPPP 1734
Score = 31.1 bits (67), Expect = 0.23
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +3
Query: 633 SXXXPXGGXXPPPPKXXAPPPXXXTPPPPPPXXXGXPPPXGXAXXPXXXXP 785
S P PPP + PP PP P PPP + P P
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = +2
Query: 644 PXGGXXPPPPKXXRPPPXXLXPPPP--PPPXXGXP--PPPGXXXXPTKXXPXXG 793
P P PPP PPPP PP G P PPP P G
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +1
Query: 433 TPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXP-----PPSXXPPPFXXGATP 576
TPP PPPPP+ P PPS PPP + P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +3
Query: 555 LFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGXXPPPPKXXAPPPXXXTPPPPPPXXX 734
LF G PP S P PP APP P PPP
Sbjct: 1677 LFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Query: 735 GXPPP 749
P
Sbjct: 1737 ASSAP 1741
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = -3
Query: 852 GXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGG--GGXXXXGGGRX 679
G GG G G GG G +G G GG GG GG GG GGR
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 678 XLGGG 664
GG
Sbjct: 66 GAKGG 70
Score = 32.3 bits (70), Expect = 0.10
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = -3
Query: 876 GXGGVXXVGXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGGGGXXX 697
G GG G GG GG G GG G G GG GG GG
Sbjct: 10 GRGGSR--GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Query: 696 XGGGR 682
GG +
Sbjct: 68 KGGAK 72
Score = 29.1 bits (62), Expect = 0.94
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 750 GGGGXPXXGGGGGGGXXXXGGGRXXLGGGG 661
G GG GG GG GGGR GGG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -3
Query: 831 GGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGGGGXXXXGGGRXXLGGGG 661
G G GG G + G GGG GGG GG GG GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGF----GGGRGGARGGGRGGARGGRGGRGGARGGRG 58
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPPPPG 754
PPPP PPP PP PPP PPPPG
Sbjct: 9 PPPP----PPPPGFEPPSQPPP----PPPPG 31
Score = 35.1 bits (77), Expect = 0.014
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 645 PXGGXXPPPPKXXAPPPXXXTPPPPP 722
P G PPPP PP PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.31
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 709 PPPPPPXXGXAPPPXGXPXP 768
PPPPPP G PP P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.41
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
Frame = +2
Query: 689 PPXXLXPPPPPP---PXXGXPPPP 751
PP PPPPPP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.41
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 240 NPPXXPPPP--PXXXXXGPPXKXGFXKKKKXHXP 335
NPP PPPP PP G+ KK+K P
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 686 PPPXXLXPPPPP---PPXXGXPPPP 751
PP PPPPP PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +2
Query: 800 PXXPPXPXXPPXXPPPXPTXXTPPXPXG 883
P PP P PP P P+ PP P G
Sbjct: 6 PGNPPPPPPPPGFEP--PSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 418 PPGGXTPPXXTPXKKXXGGXXKXPPPPPLXXGRXKKXPPPS 540
PPG PP P + + PPPPP + +K P+
Sbjct: 5 PPGNPPPPPPPPGFEPPS---QPPPPPPPGYVKKRKNKTPA 42
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 782 PXXGXXPXXPPXPXXPPXXPPPXP 853
P P PP PP PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Frame = +1
Query: 706 PPPPPP----PXXGXAPPPXGXPXPHXXXTP 786
PPPPPP P PPP G TP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 239 KPPXXPPPPPP 271
+PP PPPPPP
Sbjct: 19 EPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 487 PPPPPLXXGRXKKXPPPSXXPPP 555
PPPPP G PPS PPP
Sbjct: 9 PPPPPPPPG----FEPPSQPPPP 27
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/85 (23%), Positives = 24/85 (28%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXP 841
PP + P PPPPPP P++ G PP P P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 842 PPXPTXXTPPXPXGAGXXXXXXPPP 916
P T + PP
Sbjct: 284 RPPTNASTRSTGTSSSMAHSYDSPP 308
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 8/76 (10%)
Frame = +2
Query: 668 PPKXXRPP---PXXLXPPPPPPPXXGXPPPPGXXXXPTK-XXPXXGXXPXXP----PXPX 823
PP P P PPPPPPP P P P P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQA 232
Query: 824 XPPXXPPPXPTXXTPP 871
P PPP P PP
Sbjct: 233 DPLPAPPPPPPPTLPP 248
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 32.7 bits (71), Expect = 0.076
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Frame = +2
Query: 650 GGXXPPPPKXXRPPPXXLXPPPPPPP----XXGXPP--PPGXXXXPTKXXPXXGXXPXXP 811
G P PP PP L P P P PP PPG P P G P P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPG-YPAVP 546
Query: 812 PXPXXPPXXPPP 847
P P PP
Sbjct: 547 AMPGIPGATAPP 558
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/77 (31%), Positives = 24/77 (31%), Gaps = 3/77 (3%)
Frame = +2
Query: 692 PXXLXPPPPP---PPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXX 862
P P PP PP PP PG P P PP PP P P P
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNM---SQPPMVPPGMALPPGMPAPFP--G 541
Query: 863 TPPXPXGAGXXXXXXPP 913
P P G PP
Sbjct: 542 YPAVPAMPGIPGATAPP 558
Score = 29.9 bits (64), Expect = 0.54
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +2
Query: 689 PPXXLXPPPPP-PPXXGXPPPPG-XXXXPTKXXPXXGXXPXXP-PXPXXPPXXP-PPXPT 856
PP PP P PP G P P P P P P P P P P P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPG 553
Query: 857 XXTPPXPXGA 886
PP G+
Sbjct: 554 ATAPPGAPGS 563
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +2
Query: 689 PPXXLXPPPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXP 853
P P PPPPP P P PP PPP P
Sbjct: 899 PTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.9
Identities = 22/100 (22%), Positives = 25/100 (25%), Gaps = 2/100 (2%)
Frame = +3
Query: 492 PPPPXXGAXXKXPPPLXXTPPLFXGGHXXXXTXPPPPXXXXXGGXXXSXXXPXGGXXPPP 671
PPP P+ P+ P P S PPP
Sbjct: 852 PPPSTSTTAGWNDAPMLGQLPMRRAAPSMAPVRSPFPGASSAQPAAMSRTSSVSTLPPPP 911
Query: 672 P--KXXAPPPXXXTPPPPPPXXXGXPPPXGXAXXPXXXXP 785
P A P +PPPP PP P P
Sbjct: 912 PTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQP 951
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/54 (25%), Positives = 15/54 (27%)
Frame = +2
Query: 710 PPPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXPTXXTPP 871
PPPPPP PP P + P P P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQPIVVAQP 259
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 666 PPPKXXAPPPXXXTPPPPPPXXXGXPP 746
P P AP P PPPPP P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISP 755
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 713 PPPPPXXGXPPPPGXXXXPTKXXPXXGXXPXXPPXPXXPPXXPPPXP 853
PPPPP P PT P G P P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAG-PPAGATAISGNPGMPAPVP 1927
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 706 PPPPPPPXXGXAPPPXGXP 762
PPPPPP A PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAP 1900
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -3
Query: 840 GXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGGGGXXXXGGGRXXLGGGG 661
G G G GG G G GG G GG GGG GGG GG
Sbjct: 129 GARNGPAGRGGRGGFRG-------GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -3
Query: 852 GXGGGXXGGXXGXGGXXGXXPXWGXXXVGXXXXPGGGGXPXXGGGGGGGXXXXGGGRXXL 673
G GG GG G G G G GGG GGG GG GG R
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGF---------GGGSRGGFGGGSRGG--SRGGFRGGS 186
Query: 672 GGG 664
GG
Sbjct: 187 RGG 189
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 10/38 (26%)
Frame = +3
Query: 666 PPPKXXAP----------PPXXXTPPPPPPXXXGXPPP 749
PPP+ AP PP PPP P PPP
Sbjct: 9 PPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPP 46
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 662 PPPPKXXRPPPXXLXPPPPPPPXXGXPP 745
P P R PP PPPP PP
Sbjct: 211 PMEPPKFRHKKVPRGPPSPPPPVLHSPP 238
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 747 GGGXPXXGGGGGGGXXXXGGGRXXLGGG 664
GGG GG GG G GGR GGG
Sbjct: 446 GGGS--RGGRGGFGGRGGFGGRGGFGGG 471
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 692 PXXLXPPPPPPP 727
P + PPPPPPP
Sbjct: 1091 PSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.148 0.510
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,550,462
Number of Sequences: 5004
Number of extensions: 55942
Number of successful extensions: 1143
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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