Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D16
         (891 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.80 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   4.3  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   4.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   7.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -1

Query: 378 YYLLFEDSHHIFLRFPSCIDHYXKALIICNFVKGPIFLYPFLGKI 244
           Y  L    +H  ++ P  +D Y    ++C  + G + +    GKI
Sbjct: 81  YQTLLSGKNHPHIQLPKHVDQYLLEQLVCEQLGGFLLILTPNGKI 125


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 517 FIVFPF*VSDLNHSKRTLSRS-TERTSCTSVLYVCVYLCKIYSFF 386
           F +  F  SDL    R      +   SC SV++ C++  K+   F
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVF 118


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = -3

Query: 517 FIVFPF*VSDLNHSKRTLSRS-TERTSCTSVLYVCVYLCKIYSFF 386
           F +  F  SDL    R      +   SC SV++ C++  K+   F
Sbjct: 74  FDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVF 118


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 496 VSDLNHSKRTLSRSTERTSCTSVLYVCVYLCKIYSFFLYILLIV*GFTPYFFAI 335
           +S++  + R L+    R S   ++ V + L  +YSF L+   I  G+  Y F +
Sbjct: 112 LSEIKENTR-LAEKQARISILELVAVHLVLAFLYSFDLFANGITFGWHTYIFDV 164


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 317 WSMQDGNRKKIWCESSNNK*YVQE 388
           W+  D      +CE+ NNK +  E
Sbjct: 686 WTSSDNPCTTCFCENGNNKCFTME 709


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 225 SSSFLVLGFQNDILTLFLFEKLNFNW 148
           S SF + G   D+LTLF+ E+L+  W
Sbjct: 144 SLSFNLFG---DLLTLFIKEELDLVW 166


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 466 LSRSTERTSCTSVLYVCVYLCKIYSFFLYILL 371
           L R     S  +V ++C+YL  I +  +Y LL
Sbjct: 276 LIRDVGNASGYTVTFLCLYLFLIITLTIYGLL 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,742
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)