Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D16
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0127 - 18401461-18401464,18401868-18403876,18404060-184042...    33   0.23 
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511...    31   1.2  
08_02_1258 - 25670092-25670152,25671124-25671327,25671400-256716...    29   6.6  
03_06_0071 + 31465707-31466237,31467455-31468075,31468438-314685...    29   6.6  
06_01_0255 - 1900508-1900549,1900728-1900817,1900902-1900995,190...    28   8.7  
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549...    28   8.7  

>01_05_0127 -
           18401461-18401464,18401868-18403876,18404060-18404237,
           18404381-18404958,18405609-18405611
          Length = 923

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -2

Query: 380 HITYCLRIHTIFFCD 336
           H+T CL++HT+FFCD
Sbjct: 708 HVTRCLKMHTVFFCD 722


>09_06_0303 -
           22149214-22149474,22150099-22150236,22150856-22151100,
           22151344-22151809
          Length = 369

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 399 ILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSETQNGNTINEEQLQSKATNLEK 557
           +  ++ + Y++  QD+ S D+ K  FE FK+  +  N  N+++  S    L K
Sbjct: 42  LYERWRRVYASSSQDLPSSDMMKSRFEAFKANARQVNEFNKKEGMSYTLGLNK 94


>08_02_1258 -
           25670092-25670152,25671124-25671327,25671400-25671611,
           25671701-25671749,25671833-25672612,25672696-25672767,
           25672907-25672954,25673053-25673127,25673238-25673312,
           25673614-25673668,25673931-25674016,25674759-25674988
          Length = 648

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +3

Query: 375 NMYRKKEYILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSETQNGNTINEEQLQSKATN 548
           ++++  +++ +KY  T   +V + R  +L +     F  + QNG+      L S ATN
Sbjct: 167 DLHKNDDWLKNKYHPTNLEIVMESRRNELARTAANQFLQDLQNGSLDIGPGLTSSATN 224


>03_06_0071 +
           31465707-31466237,31467455-31468075,31468438-31468520,
           31468895-31468979
          Length = 439

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +3

Query: 459 LDKVLFEWFKSETQNGNTINEEQLQSKATNLEKVRVML 572
           LDK+L  WF ++TQ+  ++  + +Q+K T++  ++  L
Sbjct: 300 LDKILKTWFSNKTQDSKSM--QFIQAKVTSIPLIKFRL 335


>06_01_0255 -
           1900508-1900549,1900728-1900817,1900902-1900995,
           1901119-1901315,1901838-1901957,1902559-1902654,
           1902744-1902869,1903125-1903221,1904476-1904546,
           1904629-1904724,1904803-1904955,1904993-1905136
          Length = 441

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +3

Query: 321 QCKMEIAKKYGVNPQTISN--MYRKKEYILHKYTQTYSTLVQDVRSVDLDKVLFEWFKSE 494
           QC+  I KK+ + P   +N  M  K   ++H++  TY  +  D+  +D  K ++E  K+ 
Sbjct: 48  QCR-SILKKFSIFPTAYNNFRMSAKIAPVIHEW--TYDAMCHDLLEMDGQKYIYEVSKAG 104

Query: 495 TQ 500
           ++
Sbjct: 105 SE 106


>01_06_0795 -
           32051794-32053362,32053452-32053595,32054102-32054965,
           32055335-32055892
          Length = 1044

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 559 TFSRFVALLCNCSSFIVFPF*VSDLNHSKRTLSRSTERTSCTSVLYVCVYLC 404
           T+ +  A+  NC+  +V    V+ LNH +R L RS ER + +      + LC
Sbjct: 546 TWEKLSAIRANCAIELVLDECVALLNHMRR-LKRSAERAAASQGHGPTIRLC 596


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,940,418
Number of Sequences: 37544
Number of extensions: 269916
Number of successful extensions: 544
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)