Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D16
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical ...    31   0.84 
AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical ...    31   0.84 
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...    31   0.84 

>AC006651-8|AAX22286.1|  716|Caenorhabditis elegans Hypothetical
           protein H06I04.3b protein.
          Length = 716

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 140 VGIQLKFSFSNKNSVRMSFWNPSTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI 298
           +G Q+ +S     ++    WN    N+EDL        KK Y K  P+TK Q+
Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQV 688


>AC006651-7|AAX22287.1|  786|Caenorhabditis elegans Hypothetical
           protein H06I04.3c protein.
          Length = 786

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 140 VGIQLKFSFSNKNSVRMSFWNPSTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI 298
           +G Q+ +S     ++    WN    N+EDL        KK Y K  P+TK Q+
Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQV 688


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +2

Query: 140 VGIQLKFSFSNKNSVRMSFWNPSTKNEEDLSQLMHIFPKKGYKKIGPLTKLQI 298
           +G Q+ +S     ++    WN    N+EDL        KK Y K  P+TK Q+
Sbjct: 636 IGEQMIYSAKAARNLEDEAWNRYANNDEDLPDWFADDEKKHYFKQTPVTKEQV 688


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,578
Number of Sequences: 27780
Number of extensions: 281945
Number of successful extensions: 673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)