Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_D04
(897 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y113 Cluster: Negative elongation factor B homolog; n... 260 3e-68
UniRef50_UPI0000E4898B Cluster: PREDICTED: hypothetical protein;... 176 7e-43
UniRef50_Q8WX92 Cluster: Negative elongation factor B; n=64; Eut... 159 1e-37
UniRef50_A7T0W2 Cluster: Predicted protein; n=1; Nematostella ve... 132 1e-29
UniRef50_Q54Q08 Cluster: Putative uncharacterized protein; n=1; ... 68 4e-10
UniRef50_Q018S9 Cluster: Homology to unknown gene; n=1; Ostreoco... 43 0.009
UniRef50_Q7RN37 Cluster: CCAAT-box DNA binding protein subunit B... 38 0.26
UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.46
UniRef50_Q4XL76 Cluster: Putative uncharacterized protein; n=3; ... 37 0.61
UniRef50_Q2L5W5 Cluster: Putative uncharacterized protein; n=2; ... 36 1.9
UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_Q583P1 Cluster: Putative uncharacterized protein; n=3; ... 34 4.3
UniRef50_A5JZC0 Cluster: Putative uncharacterized protein; n=3; ... 33 7.5
UniRef50_A3IB65 Cluster: MlrC-like protein; n=3; Bacillaceae|Rep... 33 9.9
>UniRef50_Q9Y113 Cluster: Negative elongation factor B homolog; n=6;
Endopterygota|Rep: Negative elongation factor B homolog
- Drosophila melanogaster (Fruit fly)
Length = 594
Score = 260 bits (637), Expect = 3e-68
Identities = 124/185 (67%), Positives = 139/185 (75%)
Frame = +1
Query: 199 GTGLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDF 378
GTGLE+V +PGQ +LR+ALTSCTDPLKAIE FQLENG+ HGVRRLDF
Sbjct: 12 GTGLEDVNIPGQAYLREALTSCTDPLKAIESFQLENGVLLPSLRPMLPLLDLHGVRRLDF 71
Query: 379 HTSVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPH 558
HTS++EELR+KLIAHI FPVVRVK+LRPV+M IL+N H
Sbjct: 72 HTSLMEELRDKLIAHINEMGQKEPRERDKKLKELLVKSFPVVRVKSLRPVVMAILRNTQH 131
Query: 559 IDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENL 738
IDDKYL++LVRDRELY DTDTEVKRQIW+DNQSLFGDEVSPLLSQYIREKE +LFDH NL
Sbjct: 132 IDDKYLKILVRDRELYADTDTEVKRQIWRDNQSLFGDEVSPLLSQYIREKEHILFDHTNL 191
Query: 739 TNLFF 753
NLFF
Sbjct: 192 NNLFF 196
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3
Query: 762 PKVRRQGAVVQKLAHMIGTSVKLYDMXLQFXXXXXXXXXNVHYXT 896
PKVRRQG VVQKLA+MIGTSVKLYDM LQF NVHY T
Sbjct: 200 PKVRRQGEVVQKLANMIGTSVKLYDMVLQFLRTLFLRTRNVHYCT 244
>UniRef50_UPI0000E4898B Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 640
Score = 176 bits (428), Expect = 7e-43
Identities = 86/183 (46%), Positives = 113/183 (61%)
Frame = +1
Query: 205 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 384
G EEVG+ G LR+ALT+CTDPL+AIE+FQ ENGI H ++R FH
Sbjct: 3 GFEEVGIAGSVHLREALTNCTDPLQAIEDFQSENGILLPTLQPALPLLDLHMIQRFAFHH 62
Query: 385 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHID 564
S++EELREKL++ FP++RVK+++PV+M ++K +P I
Sbjct: 63 SIMEELREKLMSRAQELAKSDTKGRFKTIEDLLSKCFPLIRVKSIQPVVMSVMKCLPKIP 122
Query: 565 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHENLTN 744
+KYL VLV DR LY+ EVK+QIWQ N SLFGDEVSPLL+ YI+ KE VLF E + +
Sbjct: 123 EKYLTVLVEDRSLYDVASIEVKQQIWQRNPSLFGDEVSPLLTDYIKNKESVLFGSEAVNS 182
Query: 745 LFF 753
F
Sbjct: 183 QMF 185
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +3
Query: 762 PKVRRQGAVVQKLAHMIGTSVKLYDMXLQFXXXXXXXXXNVHYXT 896
PK+RRQG VVQKL M+G SVKL+DM LQF N+HY T
Sbjct: 190 PKMRRQGHVVQKLTGMVGKSVKLFDMVLQFLRTLFLSTRNMHYCT 234
>UniRef50_Q8WX92 Cluster: Negative elongation factor B; n=64;
Euteleostomi|Rep: Negative elongation factor B - Homo
sapiens (Human)
Length = 580
Score = 159 bits (385), Expect = 1e-37
Identities = 81/187 (43%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Frame = +1
Query: 205 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 384
GL+++GV L++ LT+CT+PLKAIE+FQ ENG+ HG RL+FH
Sbjct: 4 GLQDLGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFHQ 63
Query: 385 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXX-FPVVRVKALRPVIMGILKNIPHI 561
SV +ELR+KL+ + F +V++ +L+PV+M ++K++P +
Sbjct: 64 SVFDELRDKLLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKV 123
Query: 562 DDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHE--N 735
+K L++++ D+ELY EVKRQIWQDNQ+LFGDEVSPLL QYI EKE LF E
Sbjct: 124 PEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKESALFSTELSV 183
Query: 736 LTNLFFP 756
L N F P
Sbjct: 184 LHNFFSP 190
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +3
Query: 762 PKVRRQGAVVQKLAHMIGTSVKLYDMXLQFXXXXXXXXXNVHYXT 896
PK RRQG VVQ+L M+G +VKLYDM LQF NVHY T
Sbjct: 192 PKTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCT 236
>UniRef50_A7T0W2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 577
Score = 132 bits (319), Expect = 1e-29
Identities = 73/189 (38%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Frame = +1
Query: 205 GLEEVGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHT 384
G E G+PG LR AL++ +D IE FQ +NGI HGVRRLDFH+
Sbjct: 3 GFERAGLPGIEHLRQALSNSSDLAATIESFQHDNGILLPSLQSALPFLDLHGVRRLDFHS 62
Query: 385 SVLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHID 564
SV+E LRE ++ + FP + VK LRPV++ ++K++P I+
Sbjct: 63 SVMEHLRESVLEKVKDLSTQKLEEILEQS-------FPFIHVKELRPVVVAVMKHLPKIN 115
Query: 565 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDVLFDHE-NLT 741
D+ L + D +LY D EVKRQIW + LFGD V PLL+QYI K +L E + +
Sbjct: 116 DECLEHIANDAKLYEDCPIEVKRQIWSKHHHLFGDAVGPLLNQYIEAKYTLLHSTEAHNS 175
Query: 742 NLFFPLHQK 768
+ FF + K
Sbjct: 176 HSFFSVPSK 184
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +3
Query: 765 KVRRQGAVVQKLAHMIGTSVKLYDMXLQFXXXXXXXXXNVHYXT 896
K RRQ A+VQ LA MIG S+ LY++ LQF VHY T
Sbjct: 184 KTRRQHAIVQGLAKMIGKSLSLYNLVLQFLRTLFLRANEVHYCT 227
>UniRef50_Q54Q08 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 854
Score = 67.7 bits (158), Expect = 4e-10
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Frame = +1
Query: 217 VGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXX---HGVRRLDFHTS 387
+G G + +L++ T PL+ I +FQ ENGI H + R D + +
Sbjct: 6 IGNLGSEKILTSLSTTTYPLQFISQFQQENGISKKSLPTVSPVLNLLDLHQIPRGDLYLN 65
Query: 388 VLEELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNI-PHID 564
+L L++ L+ I FP + + L+ + M ++K + P +
Sbjct: 66 LLSSLKKDLLLKINTLNKHELEKLLEQT-------FPYIGFEELQEIPMNVMKRLTPEVP 118
Query: 565 DKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIRE 705
+L L ELY EVKRQIW N+ LF +++ PL++QYI +
Sbjct: 119 VAFLLKLAEAEELYEQCPIEVKRQIWIVNEELFKEKIKPLINQYIED 165
>UniRef50_Q018S9 Cluster: Homology to unknown gene; n=1;
Ostreococcus tauri|Rep: Homology to unknown gene -
Ostreococcus tauri
Length = 771
Score = 43.2 bits (97), Expect = 0.009
Identities = 32/163 (19%), Positives = 62/163 (38%)
Frame = +1
Query: 217 VGVPGQTFLRDALTSCTDPLKAIEEFQLENGIXXXXXXXXXXXXXXHGVRRLDFHTSVLE 396
+G G F+ L+ TD ++E + + G+RR + + +LE
Sbjct: 35 IGGEGGDFIAATLSRATDVQASMERVRALGALSDRDAEPVLGLLSALGIRRGEAYREMLE 94
Query: 397 ELREKLIAHIXXXXXXXXXXXXXXXXXXXXXXFPVVRVKALRPVIMGILKNIPHIDDKYL 576
++LI + FP + ++ L+ V + + ++ + YL
Sbjct: 95 RATKELIRRVETLPQGTLLSLLDAS-------FPYIGIEELKAVPLAVFAHMSPVPSSYL 147
Query: 577 RVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIRE 705
+ + RD ++ EV+RQ W + L SP + Y E
Sbjct: 148 KQVSRDLVIFRQLPVEVQRQCWALDWQLLRRHASPSMMAYGEE 190
>UniRef50_Q7RN37 Cluster: CCAAT-box DNA binding protein subunit B,
putative; n=2; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA
binding protein subunit B, putative - Plasmodium yoelii
yoelii
Length = 1480
Score = 38.3 bits (85), Expect = 0.26
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 505 RVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLFGDE 672
+V+ ++P+ +L+ I I L+VLV D + Y T VKR+IW LF +E
Sbjct: 185 QVREIQPLFSMVLEKINIIPISILKVLVEDTPAAKYFYEITSINVKRKIWILCPELFFEE 244
Query: 673 VSPLLSQYIREKEDVLFDHENLTNL 747
V ++ + I + + H +TNL
Sbjct: 245 VEDIIEEIILRMK-LKNSHNYITNL 268
>UniRef50_Q8IKX1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1653
Score = 37.5 bits (83), Expect = 0.46
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +1
Query: 496 PVVRVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLF 663
P+ +V+ ++P+ +L+ I I K L +LV D + Y T VKR+IW F
Sbjct: 147 PMFQVREIQPLFSVLLEKINVIPVKILNILVEDTPAAQYFYEITCLNVKRKIWVMWAQKF 206
Query: 664 GDEVSPLLSQYIREKEDVLFDHENLTNL 747
+E+ L+ + I + + +HE + NL
Sbjct: 207 YEEIEQLVEEIIIHMK-LNDNHEYINNL 233
>UniRef50_Q4XL76 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 647
Score = 37.1 bits (82), Expect = 0.61
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 505 RVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLFGDE 672
+V+ ++P+ +L I I L+VLV D + Y T VKR+IW LF +E
Sbjct: 151 QVREIQPLFSMVLDKINIIPIDILKVLVEDTPAAKSFYEITSINVKRKIWILCPELFFEE 210
Query: 673 VSPLLSQYIREKEDVLFDHENLTNL 747
V ++ + I + + +H +TNL
Sbjct: 211 VEHIIEEIILRMK-LKNNHYYITNL 234
>UniRef50_Q2L5W5 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Clostridium perfringens
Length = 549
Score = 35.5 bits (78), Expect = 1.9
Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 544 KNIPHIDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGD-EVSPLLSQYIREKEDVL 720
K++ + ++++ L ++ N +T ++ + DN S+F D + +L +Y EKE +L
Sbjct: 305 KSVDDLAEEFISFLENIKKNKNKIETYIETCKYLDNDSMFRDNQFIKILEKYFNEKEIIL 364
Query: 721 FDHE 732
FD++
Sbjct: 365 FDNK 368
>UniRef50_A5K3Q3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1669
Score = 34.7 bits (76), Expect = 3.2
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 496 PVVRVKALRPVIMGILKNIPHIDDKYLRVLVRD----RELYNDTDTEVKRQIWQDNQSLF 663
P+ +V+ ++P+ +L I I L+ LV + + Y T T+VKR+IW F
Sbjct: 148 PMFQVREMQPLFSLLLDKIDIIPIGILKTLVEETPSAQYFYEITSTKVKRKIWVLCPHKF 207
Query: 664 GDEVSPLLSQYI 699
+V P++ + I
Sbjct: 208 YQQVEPIIDEII 219
>UniRef50_Q583P1 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 529
Score = 34.3 bits (75), Expect = 4.3
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 499 VVRVKALRPVIMGILKNIPHIDDKYLRVLVRDRELY---NDTDTEVKRQIWQDNQSLFGD 669
V R +R +++ + + DK + ++ +LY D +R ++Q QS GD
Sbjct: 185 VSRKAIMRELVLTADGKLGNGKDKVMELVHNAYDLYVKRRDDTVNTQRYLYQVVQS--GD 242
Query: 670 EVSPLLSQYIREKEDVLFDHENLTNLFFPLHQK*EDKVQLF 792
E S +R K L+D ++ +LFFP QK D V F
Sbjct: 243 EKSASQPGLMRVKRYPLYDVKSFKSLFFPNKQKLIDLVDQF 283
>UniRef50_A5JZC0 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2767
Score = 33.5 bits (73), Expect = 7.5
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 635 KYGKTTSHCLEMKFLHSSVSTSGRKKMFYLIMKISLI-YFFPFTKSKKTR 781
K GKTTS C ++K LH + S RKK YF PF + K +
Sbjct: 21 KKGKTTSRCKKVKGLHKAKSNEKRKKSSKNFKTFKTFRYFKPFRQFKNAK 70
>UniRef50_A3IB65 Cluster: MlrC-like protein; n=3; Bacillaceae|Rep:
MlrC-like protein - Bacillus sp. B14905
Length = 496
Score = 33.1 bits (72), Expect = 9.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 547 NIPHIDDKYLRVLVRDRELYNDTDTEVKRQIWQDNQSLFGDEVSP 681
NIP + + V D+EL + T E+ +IW + F D ++P
Sbjct: 237 NIPEVGVSVVTVTNNDQELADQTAEEIALEIWNTKEMFFPDIINP 281
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,857,699
Number of Sequences: 1657284
Number of extensions: 11737325
Number of successful extensions: 28799
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28789
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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