Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D04
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0275 + 2121758-2122693                                           31   1.2  
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675...    28   8.8  

>03_01_0275 + 2121758-2122693
          Length = 311

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/64 (32%), Positives = 25/64 (39%)
 Frame = -2

Query: 374 SSRRTPCRSSKGNIGLKEGNKIPFSS*NSSIAFNGSVQLVRASRKKVCPGTPTSSRPVPG 195
           SS   P  SS G I L     IP        A    + L+R  R    PG   SSRP   
Sbjct: 16  SSSPAPPVSSPGAIPLLRHTPIPHHRRRPLAALRTRIMLLRPLRAAASPGPAASSRPARD 75

Query: 194 SLLD 183
            ++D
Sbjct: 76  RVID 79


>03_06_0222 +
           32466379-32466741,32466849-32466948,32467443-32467547,
           32467627-32467789,32467995-32468115,32468625-32468705,
           32468813-32468911,32468955-32468986,32468987-32469137,
           32469477-32469563,32470290-32470409,32470514-32470645,
           32470743-32470840,32470919-32471042,32471126-32471233,
           32471822-32471957,32472751-32472861,32472963-32473026,
           32473133-32473205,32473762-32473938,32474012-32474122,
           32474189-32474449,32474811-32474981,32475073-32475228,
           32475590-32475823,32475936-32476103,32476316-32476425,
           32476513-32477041
          Length = 1394

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 550 IPHIDDKYLRVLVRDRELY-NDTDTEVKRQIWQDNQSLFGDEVSPLLSQYIREKEDV 717
           +P I+   LRV+  D   Y +D D  V   IWQ+ +       S + + ++ +  D+
Sbjct: 605 LPVINMPSLRVIYEDHRTYASDADVNVSESIWQELEEEMIPSSSIVRTNWLEKSPDL 661


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,489,109
Number of Sequences: 37544
Number of extensions: 313786
Number of successful extensions: 673
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)