Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D03
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl me...   135   9e-32
U37432-1|AAA80540.2|  226|Drosophila melanogaster protein D-aspa...   135   9e-32
AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p pro...   135   9e-32
AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p pro...   135   9e-32
AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA ...   135   9e-32
AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA...    31   2.8  

>U43737-1|AAA86272.2|  226|Drosophila melanogaster isoaspartyl
           methyltransferase protein.
          Length = 226

 Score =  135 bits (326), Expect = 9e-32
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 163 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 342
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 343 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTAC 447
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTAC 95



 Score =  132 bits (320), Expect = 5e-31
 Identities = 62/113 (54%), Positives = 81/113 (71%)
 Frame = +2

Query: 479 LVGMERISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTL 658
           +VG+E  +ELV  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  
Sbjct: 111 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT 170

Query: 659 PQALIDQLKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 817
           P  LI+QL  GGRLIVPVGP+GG Q++ Q DK  +G   + +LM V+YVPLTD
Sbjct: 171 PTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223


>U37432-1|AAA80540.2|  226|Drosophila melanogaster protein
           D-aspartyl, L-isoaspartylmethyltransferase protein.
          Length = 226

 Score =  135 bits (326), Expect = 9e-32
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 163 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 342
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 343 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTAC 447
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTAC 95



 Score =  132 bits (320), Expect = 5e-31
 Identities = 62/113 (54%), Positives = 81/113 (71%)
 Frame = +2

Query: 479 LVGMERISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTL 658
           +VG+E  +ELV  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  
Sbjct: 111 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT 170

Query: 659 PQALIDQLKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 817
           P  LI+QL  GGRLIVPVGP+GG Q++ Q DK  +G   + +LM V+YVPLTD
Sbjct: 171 PTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223


>AY075527-1|AAL68334.1|  226|Drosophila melanogaster RE74472p
           protein.
          Length = 226

 Score =  135 bits (326), Expect = 9e-32
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 163 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 342
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 343 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTAC 447
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTAC 95



 Score =  132 bits (320), Expect = 5e-31
 Identities = 62/113 (54%), Positives = 81/113 (71%)
 Frame = +2

Query: 479 LVGMERISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTL 658
           +VG+E  +ELV  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  
Sbjct: 111 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT 170

Query: 659 PQALIDQLKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 817
           P  LI+QL  GGRLIVPVGP+GG Q++ Q DK  +G   + +LM V+YVPLTD
Sbjct: 171 PTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223


>AY070630-1|AAL48101.1|  226|Drosophila melanogaster RE73839p
           protein.
          Length = 226

 Score =  135 bits (326), Expect = 9e-32
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 163 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 342
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 343 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTAC 447
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTAC 95



 Score =  132 bits (320), Expect = 5e-31
 Identities = 62/113 (54%), Positives = 81/113 (71%)
 Frame = +2

Query: 479 LVGMERISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTL 658
           +VG+E  +ELV  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  
Sbjct: 111 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT 170

Query: 659 PQALIDQLKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 817
           P  LI+QL  GGRLIVPVGP+GG Q++ Q DK  +G   + +LM V+YVPLTD
Sbjct: 171 PTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223


>AE014297-269|AAF52012.1|  226|Drosophila melanogaster CG2152-PA
           protein.
          Length = 226

 Score =  135 bits (326), Expect = 9e-32
 Identities = 63/95 (66%), Positives = 72/95 (75%)
 Frame = +1

Query: 163 MAWRSHGANNVDLIRNLRTNGIIKSDTVANAMLAVDRKNYCPSSPYQDSPQSIGFSATIS 342
           MAWRS GANN DLIR L+ +G+I SD VA AM   DRK+Y P +PY D+PQ IG   TIS
Sbjct: 1   MAWRSVGANNEDLIRQLKDHGVIASDAVAQAMKETDRKHYSPRNPYMDAPQPIGGGVTIS 60

Query: 343 APHMHAHALEKLKNQLVPGEKALDVGSGSGYLTAC 447
           APHMHA ALE L++ L PG + LDVGSGSGYLTAC
Sbjct: 61  APHMHAFALEYLRDHLKPGARILDVGSGSGYLTAC 95



 Score =  132 bits (320), Expect = 5e-31
 Identities = 62/113 (54%), Positives = 81/113 (71%)
 Frame = +2

Query: 479 LVGMERISELVNLATKNIQNDNPSLLSSERIKLVVGDGRLGYPSEAPYSAIHVGAAAPTL 658
           +VG+E  +ELV  +  N+  D+ S+L S ++ +V GDGR GYP  APY+AIHVGAAAP  
Sbjct: 111 IVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDT 170

Query: 659 PQALIDQLKPGGRLIVPVGPEGGEQHLTQVDKAQDGTTTVKKLMSVIYVPLTD 817
           P  LI+QL  GGRLIVPVGP+GG Q++ Q DK  +G   + +LM V+YVPLTD
Sbjct: 171 PTELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223


>AE014134-2885|AAF53636.3| 1912|Drosophila melanogaster CG7527-PA,
           isoform A protein.
          Length = 1912

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 755 LYQPESNVVHHPQALQELLASLPVSIDQLELVVKWELQPRHELH-CKGLQMDNRD 594
           + + +S  +H P+   + L  LPV +D  +     E +P+ E+H  K    DNRD
Sbjct: 73  IIKKKSKTIHEPEVPIDFLMGLPVLLDS-DFSDSEECRPKSEIHVAKPETEDNRD 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,010,923
Number of Sequences: 53049
Number of extensions: 938340
Number of successful extensions: 2455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2455
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)