Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D02
         (1188 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             29   7.2  
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956...    29   7.2  
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863...    29   7.2  
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...    29   9.5  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/41 (34%), Positives = 14/41 (34%)
 Frame = +2

Query: 377 RLSACGXSXXPHXXXPXXVGXXXPPPPPXXXVPXPXXAXPP 499
           RL   G    P    P       PPPPP    P P    PP
Sbjct: 81  RLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121


>04_04_1641 +
           34993807-34994589,34994924-34995022,34995521-34995648,
           34996095-34996235,34996456-34996542,34996627-34996780,
           34998569-34998628,34999019-34999447,34999524-34999819,
           35000278-35000407,35000690-35001187
          Length = 934

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 446 PPPPPXXXVPXPXXAXPPRXXAXXXP 523
           PPPPP   VP P    PP   +   P
Sbjct: 38  PPPPPPSPVPSPAPPPPPHRPSPSPP 63


>03_02_0455 -
           8630543-8630893,8630994-8631068,8631149-8631223,
           8631332-8631397,8631891-8631967,8632659-8633070
          Length = 351

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +2

Query: 407 PHXXXPXXVGXXXPPPPPXXXVPXPXXAXPP 499
           P    P  VG   PPPPP      P  + PP
Sbjct: 292 PPRIPPPPVGGTQPPPPPPPLANGPPRSIPP 322


>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = -3

Query: 499 GGXRXAGXGDXXXXXRGRXGRPXXXRGXPVGXXGXATG 386
           GG R  G G      RGR G     RG P G  G   G
Sbjct: 148 GGGRGGGRGGGRGGFRGRGGGGFRGRGAPRGRGGPPRG 185


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.134    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,864
Number of Sequences: 37544
Number of extensions: 210277
Number of successful extensions: 1400
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3619931772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)