BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_D02
(1188 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid... 31 8.2
U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein. 31 8.2
BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid ... 31 8.2
BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein. 31 8.2
BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein. 31 8.2
AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HM... 31 8.2
AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein. 31 8.2
>U88154-1|AAC17709.1| 1021|Homo sapiens proline and glutamic acid
rich nuclear protein isoform protein.
Length = 1021
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 715 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 748
>U88153-1|AAC17708.2| 1284|Homo sapiens PELP1 protein.
Length = 1284
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 978 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 1011
>BC069058-1|AAH69058.1| 1130|Homo sapiens proline, glutamic acid and
leucine rich protein 1 protein.
Length = 1130
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 833 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 866
>BC010457-1|AAH10457.2| 1048|Homo sapiens PELP1 protein protein.
Length = 1048
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 751 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 784
>BC002875-1|AAH02875.2| 743|Homo sapiens PELP1 protein protein.
Length = 743
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 446 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 479
>AY882602-1|AAW80659.1| 1061|Homo sapiens transcription factor HMX3
protein.
Length = 1061
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 764 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 797
>AF547989-1|AAN41255.1| 1130|Homo sapiens MNAR protein.
Length = 1130
Score = 31.1 bits (67), Expect = 8.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 422 PXXVGXXXPPPPPXXXVPXPXXAXPPRXXAXXXP 523
P G PPPPP VP P PP+ P
Sbjct: 833 PAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTP 866
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.134 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,326,210
Number of Sequences: 237096
Number of extensions: 1087360
Number of successful extensions: 5318
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4400
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16679007690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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