Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D01
         (1361 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041168-1|AAH41168.1|  355|Homo sapiens LCN12 protein protein.        32   5.5  

>BC041168-1|AAH41168.1|  355|Homo sapiens LCN12 protein protein.
          Length = 355

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = +2

Query: 1136 RXSXSXPGXP------PPXXPCPGATXXIFPPXXPRLGGXXPSSXPXNXXQXLVP 1282
            R + S PG P      PP  PCPG +    P   P LG   PS  P +    L+P
Sbjct: 288  RPTSSHPGSPVLGYLLPPQVPCPGPSP---PSGSPVLGHLLPSPIPAHKELGLIP 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,221,452
Number of Sequences: 237096
Number of extensions: 788943
Number of successful extensions: 2665
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19731288240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)