Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_D01
         (1361 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF184225-1|AAD55736.1|  377|Drosophila melanogaster BcDNA.GH0604...    30   8.5  
AE013599-4026|AAF47319.2|  377|Drosophila melanogaster CG2668-PA...    30   8.5  

>AF184225-1|AAD55736.1|  377|Drosophila melanogaster BcDNA.GH06048
            protein.
          Length = 377

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = +2

Query: 1133 PRXSXSXPGXPPPXXPCPGATXXIFPPXXPRLGGXXPSSXPXNXXQXLVPXDF 1291
            P      PG P P  P PG       P  P  GG  P   P +    L P  F
Sbjct: 186  PSPGGPSPGGPSPGGPSPGGP----SPGGPSPGGPFPGGSPPSPGGPLGPWQF 234


>AE013599-4026|AAF47319.2|  377|Drosophila melanogaster CG2668-PA
            protein.
          Length = 377

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = +2

Query: 1133 PRXSXSXPGXPPPXXPCPGATXXIFPPXXPRLGGXXPSSXPXNXXQXLVPXDF 1291
            P      PG P P  P PG       P  P  GG  P   P +    L P  F
Sbjct: 186  PSPGGPSPGGPSPGGPSPGGP----SPGGPSPGGPFPGGSPPSPGGPLGPWQF 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,589,764
Number of Sequences: 53049
Number of extensions: 228677
Number of successful extensions: 846
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7456556430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)