BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C24
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 69 8e-14
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 69 8e-14
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 66 3e-13
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 66 3e-13
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 66 3e-13
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 28 0.13
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.9
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 3.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 5.1
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 68.5 bits (160), Expect = 8e-14
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +3
Query: 654 APGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPMAKG 815
APGN L D AL+W++ N +FGGDP+ +TIFGESAG +SVS ++SP+ +G
Sbjct: 217 APGNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRG 270
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 68.5 bits (160), Expect = 8e-14
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = +3
Query: 654 APGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPMAKG 815
APGN L D AL+W++ N +FGGDP+ +TIFGESAG +SVS ++SP+ +G
Sbjct: 217 APGNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRG 270
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 66.5 bits (155), Expect = 3e-13
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +3
Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
GFL + PGN LKD AL+WV NI FGG+P +T+ G SAG ASV + LSP+
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 223
Query: 807 AKGCSQ 824
+ G Q
Sbjct: 224 SAGLFQ 229
Score = 43.6 bits (98), Expect = 3e-06
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = +2
Query: 335 QAPGPEPKWDGIYDAIHEEIRCNQ--QFSTN---LAIGRRDCLNLNIYTPFNTDPGDKLA 499
+AP P W G A C Q Q N G DCL LN+Y P + P L
Sbjct: 64 KAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLP 123
Query: 500 VMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLNIQG 628
V+ +YL+ VI VTINYRL I G
Sbjct: 124 VIFWIHGGAFQFGSGIPMGA--KYLMDSDVIFVTINYRLGILG 164
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 66.5 bits (155), Expect = 3e-13
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +3
Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
GFL + PGN LKD AL+WV NI FGG+P +T+ G SAG ASV + LSP+
Sbjct: 35 GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 94
Query: 807 AKGCSQ 824
+ G Q
Sbjct: 95 SAGLFQ 100
Score = 29.9 bits (64), Expect = 0.033
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 566 RYLVSKGVILVTINYRLNIQG 628
+YL+ VI VTINYRL I G
Sbjct: 15 KYLMDSDVIFVTINYRLGILG 35
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 66.5 bits (155), Expect = 3e-13
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +3
Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
GFL + PGN LKD AL+WV NI FGG+P +T+ G SAG ASV + LSP+
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 223
Query: 807 AKGCSQ 824
+ G Q
Sbjct: 224 SAGLFQ 229
Score = 43.6 bits (98), Expect = 3e-06
Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Frame = +2
Query: 335 QAPGPEPKWDGIYDAIHEEIRCNQ--QFSTN---LAIGRRDCLNLNIYTPFNTDPGDKLA 499
+AP P W G A C Q Q N G DCL LN+Y P + P L
Sbjct: 64 KAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLP 123
Query: 500 VMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLNIQG 628
V+ +YL+ VI VTINYRL I G
Sbjct: 124 VIFWIHGGAFQFGSGIPMGA--KYLMDSDVIFVTINYRLGILG 164
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 27.9 bits (59), Expect = 0.13
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 440 DCLNLNIYTPFNTDPGDKLAVMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLN 619
DCL L++YT N+ K VM P YL+ K V++V+ NYR+
Sbjct: 3 DCLYLDVYT--NSLDQSK-PVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRVG 59
Query: 620 IQG 628
G
Sbjct: 60 AFG 62
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.9
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 726 RSWLYFSAPISKQPPYLSKLHCLVPL-*FPNKEIPCILSL 610
++ +Y+S + QPP + K C + + FP C+L L
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKL 171
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +2
Query: 320 LRQLEQAPGPEPKWDG---IYDAIHEEIRCNQQF 412
+R +QAPG P W I ++ IR + F
Sbjct: 577 IRNSQQAPGQSPDWPSTSQIQRGVNAAIRSQEPF 610
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 5.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 365 HPTSALDQVPVQAVL 321
HPT ALD P AV+
Sbjct: 181 HPTCALDLTPTYAVV 195
Score = 22.2 bits (45), Expect = 6.7
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +1
Query: 145 KGTVNVLLLLMFINIAWSYFIVVLILNYYCRYIIA 249
K + V +++ I W F V I+ YC+ I+
Sbjct: 269 KAAITVGVIMGVFLICWVPFFCVNIVTSYCKTCIS 303
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,919
Number of Sequences: 438
Number of extensions: 5490
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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