SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C24
         (907 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    69   8e-14
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    69   8e-14
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    66   3e-13
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           66   3e-13
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           66   3e-13
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        28   0.13 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   3.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   5.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 68.5 bits (160), Expect = 8e-14
 Identities = 29/54 (53%), Positives = 40/54 (74%)
 Frame = +3

Query: 654 APGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPMAKG 815
           APGN  L D   AL+W++ N  +FGGDP+ +TIFGESAG +SVS  ++SP+ +G
Sbjct: 217 APGNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRG 270


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 68.5 bits (160), Expect = 8e-14
 Identities = 29/54 (53%), Positives = 40/54 (74%)
 Frame = +3

Query: 654 APGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPMAKG 815
           APGN  L D   AL+W++ N  +FGGDP+ +TIFGESAG +SVS  ++SP+ +G
Sbjct: 217 APGNMGLWDQALALRWLRDNAEAFGGDPELITIFGESAGGSSVSLHLISPVTRG 270


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 66.5 bits (155), Expect = 3e-13
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = +3

Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
           GFL    +  PGN  LKD   AL+WV  NI  FGG+P  +T+ G SAG ASV +  LSP+
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 223

Query: 807 AKGCSQ 824
           + G  Q
Sbjct: 224 SAGLFQ 229



 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
 Frame = +2

Query: 335 QAPGPEPKWDGIYDAIHEEIRCNQ--QFSTN---LAIGRRDCLNLNIYTPFNTDPGDKLA 499
           +AP   P W G   A      C Q  Q   N      G  DCL LN+Y P +  P   L 
Sbjct: 64  KAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLP 123

Query: 500 VMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLNIQG 628
           V+                    +YL+   VI VTINYRL I G
Sbjct: 124 VIFWIHGGAFQFGSGIPMGA--KYLMDSDVIFVTINYRLGILG 164


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 66.5 bits (155), Expect = 3e-13
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = +3

Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
           GFL    +  PGN  LKD   AL+WV  NI  FGG+P  +T+ G SAG ASV +  LSP+
Sbjct: 35  GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 94

Query: 807 AKGCSQ 824
           + G  Q
Sbjct: 95  SAGLFQ 100



 Score = 29.9 bits (64), Expect = 0.033
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 566 RYLVSKGVILVTINYRLNIQG 628
           +YL+   VI VTINYRL I G
Sbjct: 15  KYLMDSDVIFVTINYRLGILG 35


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 66.5 bits (155), Expect = 3e-13
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = +3

Query: 627 GFLCLGIKGAPGNAALKDMVAALKWVQRNIASFGGDPDNVTIFGESAGAASVSFLVLSPM 806
           GFL    +  PGN  LKD   AL+WV  NI  FGG+P  +T+ G SAG ASV +  LSP+
Sbjct: 164 GFLSTEDEVVPGNMGLKDQSMALRWVSENIEWFGGNPKRITLIGLSAGGASVHYHYLSPL 223

Query: 807 AKGCSQ 824
           + G  Q
Sbjct: 224 SAGLFQ 229



 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
 Frame = +2

Query: 335 QAPGPEPKWDGIYDAIHEEIRCNQ--QFSTN---LAIGRRDCLNLNIYTPFNTDPGDKLA 499
           +AP   P W G   A      C Q  Q   N      G  DCL LN+Y P +  P   L 
Sbjct: 64  KAPQKIPAWIGELSATKFGFPCLQYTQLPVNPRDKIEGAEDCLYLNVYVPADRTPSQSLP 123

Query: 500 VMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLNIQG 628
           V+                    +YL+   VI VTINYRL I G
Sbjct: 124 VIFWIHGGAFQFGSGIPMGA--KYLMDSDVIFVTINYRLGILG 164


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +2

Query: 440 DCLNLNIYTPFNTDPGDKLAVMXXXXXXXXXXXXXXXXXXXPRYLVSKGVILVTINYRLN 619
           DCL L++YT  N+    K  VM                   P YL+ K V++V+ NYR+ 
Sbjct: 3   DCLYLDVYT--NSLDQSK-PVMFYVHEGAFISGTSSFHEMRPDYLLPKDVVVVSSNYRVG 59

Query: 620 IQG 628
             G
Sbjct: 60  AFG 62


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 726 RSWLYFSAPISKQPPYLSKLHCLVPL-*FPNKEIPCILSL 610
           ++ +Y+S  +  QPP + K  C + +  FP     C+L L
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKL 171


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +2

Query: 320 LRQLEQAPGPEPKWDG---IYDAIHEEIRCNQQF 412
           +R  +QAPG  P W     I   ++  IR  + F
Sbjct: 577 IRNSQQAPGQSPDWPSTSQIQRGVNAAIRSQEPF 610


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 365 HPTSALDQVPVQAVL 321
           HPT ALD  P  AV+
Sbjct: 181 HPTCALDLTPTYAVV 195



 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 145 KGTVNVLLLLMFINIAWSYFIVVLILNYYCRYIIA 249
           K  + V +++    I W  F  V I+  YC+  I+
Sbjct: 269 KAAITVGVIMGVFLICWVPFFCVNIVTSYCKTCIS 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,919
Number of Sequences: 438
Number of extensions: 5490
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -