Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C23
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 60 3e-10
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 59 7e-10
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 57 3e-09
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 43 6e-05
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 38 0.002
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 29 0.62
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.62
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.82
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.4
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.5
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 27 4.4
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 26 5.8
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 7.6
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 60.5 bits (140), Expect = 3e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +2
Query: 344 SVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGK 523
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 524 AIKNKIDDGTVRRDELFIMGK 586
AI + + V+R ++F+ K
Sbjct: 64 AIVDWCEKNNVKRTDIFLTSK 84
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 59.3 bits (137), Expect = 7e-10
Identities = 32/78 (41%), Positives = 43/78 (55%)
Frame = +2
Query: 371 LRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 550
L DG+ +P + LGT P T V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 551 TVRRDELFIMGKXWSTFH 604
R+D +++ K W H
Sbjct: 75 VPRKD-IWVTSKLWCNAH 91
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 57.2 bits (132), Expect = 3e-09
Identities = 35/90 (38%), Positives = 46/90 (51%)
Frame = +2
Query: 359 ATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 538
A L +G +P I LGT T V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 539 IDDGTVRRDELFIMGKXWSTFHRTDLXETA 628
+ V R ++++ K W HR L A
Sbjct: 71 --ESGVPRTDIWVTSKLWCNAHRAGLVPLA 98
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 42.7 bits (96), Expect = 6e-05
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +2
Query: 365 LKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 544
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 545 DGTVRRDELFIMGK 586
+ +R++++ K
Sbjct: 66 ETGTKREDIWFTSK 79
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +2
Query: 389 MPVIALGTALLPP------RLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 550
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK----EA 67
Query: 551 TVRRDELFIMGK 586
V R +LFI K
Sbjct: 68 NVPRSKLFITSK 79
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.62
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 434 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIK 532
T ++ A D+G DTA IY N E ++GKAIK
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 29.5 bits (63), Expect = 0.62
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 338 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLTTEIVETAIDMGYRAIDTAYIYGNEKLI 517
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 518 GKAIKNKIDDGTVRRDEL 571
G+ + K +G RD+L
Sbjct: 425 GEGVLTKSKNGPSMRDQL 442
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.82
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -1
Query: 333 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQ 169
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQ 102
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 390 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 259
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 384 VPSRSFKVATSFTLPFSLASFSSAILV 304
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 462 SIAVSTISVVNRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSS 316
SI STI+ GS+ +TG N P + +V T+ T +L S SS
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSS 149
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 609 PIXWRRPAGXTGRPGL 656
PI RRPAG GRP L
Sbjct: 100 PIKGRRPAGRRGRPAL 115
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 351 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 208
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,692,027
Number of Sequences: 5004
Number of extensions: 48936
Number of successful extensions: 157
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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