Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C21
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-313|AAF47532.2|  302|Drosophila melanogaster CG13929-PA...   136   4e-32
AY051875-1|AAK93299.1|  325|Drosophila melanogaster LD36863p pro...   120   3e-27
AE014296-314|AAF47531.2|  325|Drosophila melanogaster CG13929-PB...   120   3e-27

>AE014296-313|AAF47532.2|  302|Drosophila melanogaster CG13929-PA,
           isoform A protein.
          Length = 302

 Score =  136 bits (329), Expect = 4e-32
 Identities = 69/137 (50%), Positives = 85/137 (62%)
 Frame = +2

Query: 197 SDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEED 376
           ++KRPQFG R L +A++VFKHN+WD+V+WDE+QE  A+  V  NS      E  +  + D
Sbjct: 9   NEKRPQFGTRLLTDADDVFKHNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTD 68

Query: 377 ADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNTTLSSTN 556
           A K WD+FY IH NRFFKDRHWLFTEFPELAP   +A   V                   
Sbjct: 69  APKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP---------------- 110

Query: 557 DTIRNIFEIGCGVGNTI 607
              R+IFE+GCGVGNTI
Sbjct: 111 ---RSIFELGCGVGNTI 124



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = +1

Query: 610 PILQYSQDPKLFVYGCDFSSKAIDI 684
           P+LQYS +P+L V+GCDFS++AI+I
Sbjct: 126 PLLQYSSEPQLKVFGCDFSARAIEI 150



 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 714 RCXVFVMDATEADWNVPFXE 773
           RC VFVMDAT   W VPF E
Sbjct: 161 RCEVFVMDATLDHWQVPFEE 180


>AY051875-1|AAK93299.1|  325|Drosophila melanogaster LD36863p
           protein.
          Length = 325

 Score =  120 bits (288), Expect = 3e-27
 Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +2

Query: 203 KRPQ-FGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDA 379
           K+P   G+R L +A EVF+ N+WD+V+WDE+QE  A+  V  NS      E  +  + DA
Sbjct: 33  KKPSGAGSRVLTDAREVFEFNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTDA 92

Query: 380 DKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNTTLSSTND 559
            K WD+FY IH NRFFKDRHWLFTEFPELAP   +A   V                    
Sbjct: 93  PKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP----------------- 133

Query: 560 TIRNIFEIGCGVGNTI 607
             R+IFE+GCGVGNTI
Sbjct: 134 --RSIFELGCGVGNTI 147



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = +1

Query: 610 PILQYSQDPKLFVYGCDFSSKAIDI 684
           P+LQYS +P+L V+GCDFS++AI+I
Sbjct: 149 PLLQYSSEPQLKVFGCDFSARAIEI 173



 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 714 RCXVFVMDATEADWNVPFXE 773
           RC VFVMDAT   W VPF E
Sbjct: 184 RCEVFVMDATLDHWQVPFEE 203


>AE014296-314|AAF47531.2|  325|Drosophila melanogaster CG13929-PB,
           isoform B protein.
          Length = 325

 Score =  120 bits (288), Expect = 3e-27
 Identities = 65/136 (47%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
 Frame = +2

Query: 203 KRPQ-FGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDA 379
           K+P   G+R L +A EVF+ N+WD+V+WDE+QE  A+  V  NS      E  +  + DA
Sbjct: 33  KKPSGAGSRVLTDAREVFEFNAWDHVQWDEEQELAAKAAVAKNSTSKMEAEQKERFQTDA 92

Query: 380 DKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNTTLSSTND 559
            K WD+FY IH NRFFKDRHWLFTEFPELAP   +A   V                    
Sbjct: 93  PKFWDSFYGIHDNRFFKDRHWLFTEFPELAP--LAADSAVLQP----------------- 133

Query: 560 TIRNIFEIGCGVGNTI 607
             R+IFE+GCGVGNTI
Sbjct: 134 --RSIFELGCGVGNTI 147



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 16/25 (64%), Positives = 23/25 (92%)
 Frame = +1

Query: 610 PILQYSQDPKLFVYGCDFSSKAIDI 684
           P+LQYS +P+L V+GCDFS++AI+I
Sbjct: 149 PLLQYSSEPQLKVFGCDFSARAIEI 173



 Score = 33.5 bits (73), Expect = 0.39
 Identities = 14/20 (70%), Positives = 14/20 (70%)
 Frame = +3

Query: 714 RCXVFVMDATEADWNVPFXE 773
           RC VFVMDAT   W VPF E
Sbjct: 184 RCEVFVMDATLDHWQVPFEE 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,638,426
Number of Sequences: 53049
Number of extensions: 671428
Number of successful extensions: 2138
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)