Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C21
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical... 98 8e-21
Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 30 2.5
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr... 29 4.4
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 29 4.4
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 29 4.4
Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical pr... 29 5.8
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 29 5.8
U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory ... 29 5.8
U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory ... 29 5.8
U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory ... 29 5.8
U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein. 29 5.8
U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein. 29 5.8
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 29 5.8
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 5.8
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z66565-10|CAB76415.1| 281|Caenorhabditis elegans Hypothetical p... 28 7.6
EF219472-1|ABO25756.1| 127|Caenorhabditis elegans transcription... 28 7.6
AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical ... 28 7.6
>AL132949-36|CAJ58501.1| 311|Caenorhabditis elegans Hypothetical
protein Y53F4B.42 protein.
Length = 311
Score = 97.9 bits (233), Expect = 8e-21
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Frame = +2
Query: 188 DDNSDKRPQ---FGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHL 358
++N D++P+ FG R+L + +VF+HN+WD+VEW +Q+++AQ V+ + +E
Sbjct: 11 EENPDEKPKCNPFGTRFLTDDTKVFEHNAWDDVEWSPEQQEEAQRIVQGQKSMKVDEEKA 70
Query: 359 KSLEEDADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNT 538
L WDAFY ++NRFFKDR+WL EFPEL ++ S N Q
Sbjct: 71 MRLLSTPADQWDAFYAHNENRFFKDRNWLLKEFPELNVEDES-------------NLQKE 117
Query: 539 TLSSTNDTIRNIFEIGCGVGNT 604
+ I E+GCGVGNT
Sbjct: 118 KI--------EILEVGCGVGNT 131
>Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical
protein ZK1058.5 protein.
Length = 269
Score = 48.0 bits (109), Expect = 9e-06
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +2
Query: 332 QVTFTDEHLKSLEEDADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPD 475
Q + +D LE DA K+WD FY ++N FFKDR+W + + PD
Sbjct: 27 QTSISDFKRNKLEIDARKNWDKFYHRNKNNFFKDRNWSAEDLKMMCPD 74
>Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical
protein R04D3.2 protein.
Length = 406
Score = 33.1 bits (72), Expect = 0.27
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +2
Query: 188 DDNSDKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVR--NNSQVTFTDEHLK 361
DDN D + Y + + ++ E +E +EK++++K R NNS+ T EH +
Sbjct: 246 DDNEDSAEE-KKSYRRGTPKGRQEEPENDYEDEEREEKESRQKSRRSNNSRSHSTREHFQ 304
Query: 362 SLEEDADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNTT 541
E D +++ D D + R R E ++ S P R + A GN++N
Sbjct: 305 EDESD-NENEDNEEDESKPRMTNRRSRNEDEDDFFDDEDDSKPQR--NPKARRGNEKNFD 361
Query: 542 LSSTNDTIRN 571
+ + D + N
Sbjct: 362 NADSYDEVEN 371
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 212 QFGNRYLENAEEV-FKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKH 388
Q G+ ++ E+ + N D E DED++K+ EK SQV D S + KH
Sbjct: 383 QLGDEEVKECIEMSYIANEHDTDEDDEDEKKRVSEKDVPISQVESEDGSSGSSSQPLQKH 442
Query: 389 WDAFYDIHQN 418
+ DI ++
Sbjct: 443 HSSVSDISES 452
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +2
Query: 200 DKRPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDA 379
++ + Y EEV + +S + + +E++E +E++ + Q + L EED
Sbjct: 1059 EEEEEVDEEYEGEVEEVHRESSEELDDEEEEEEVMPEEEIEED-QEDEQESVLDESEEDK 1117
Query: 380 DKHWD 394
D+ WD
Sbjct: 1118 DEPWD 1122
>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
protein H03E18.1 protein.
Length = 1147
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 275 VEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEE 373
VE E+ EKK + +N+ + TDE LK +E+
Sbjct: 724 VESQEETEKKKKVTTKNSEHILDTDEVLKKIEK 756
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 NSWD-NVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKH 388
N WD + W K+ +K R Q+ FT+E +LE D H
Sbjct: 115 NMWDPRLSWLYPYMSKSPQK-RKGGQIRFTNEQTDALEHKFDSH 157
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 NSWD-NVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKH 388
N WD + W K+ +K R Q+ FT+E +LE D H
Sbjct: 60 NMWDPRLSWLYPYMSKSPQK-RKGGQIRFTNEQTDALEHKFDSH 102
>Z77665-9|CAB01223.2| 729|Caenorhabditis elegans Hypothetical
protein K02E11.1 protein.
Length = 729
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 272 NVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKHWDAFYDIHQNRFFKDRHWLFT 451
N+EWDE E++ + +++N Q +L +++H A D + R FKD L
Sbjct: 206 NIEWDEYAEEEVKHAIKHNFQQVLMP--FTNLPHVSEEHKQAI-DCNGIRTFKDALELMV 262
Query: 452 EFP 460
P
Sbjct: 263 VHP 265
>U53340-1|AAA96206.1| 658|Caenorhabditis elegans Hypothetical
protein F02E8.4 protein.
Length = 658
Score = 28.7 bits (61), Expect = 5.8
Identities = 32/164 (19%), Positives = 66/164 (40%), Gaps = 7/164 (4%)
Frame = +2
Query: 206 RPQFGNRYLENAEEVFKHNSWDNVEWDEDQEKKAQE---KVRNNSQVTF--TDEHLKSLE 370
R F ++LE E ++ S+DN D K ++ +S+ T+ T + S E
Sbjct: 124 RANFFTQFLEAKAEYYEFTSYDNRVSDIPNNKLRPTPLYSLQYDSRTTYSGTPGYSNSSE 183
Query: 371 EDADKHWDAFYDIHQNRFFKDRHWLFTEFPELAPDNTSAPVRVFSETANHGNKQNTTLSS 550
+ + A + + F+D + E + +APV S + +SS
Sbjct: 184 KSGESTSRARLAVSDLQSFQDVTHGTSSASEFPVSSANAPVESLSIGLSSSFGHTLNISS 243
Query: 551 TNDTIRNI--FEIGCGVGNTISQYCNTVKIQNYLYMAVISPLKL 676
++ ++N+ F+ + + C+T +N+ V +K+
Sbjct: 244 VSEEVQNVQAFQESSSLPFVHANQCSTSSAKNFDLFPVDPRMKI 287
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 323 NNSQVTFTDEHLKSLEEDADKH 388
NNSQ +FTDE L + +ED + H
Sbjct: 131 NNSQPSFTDEELAADDEDKNGH 152
>U41021-3|AAV28352.1| 317|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform c protein.
Length = 317
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WILT+L Y I F P +++V E V+F L
Sbjct: 44 WILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 80
>U41021-2|AAM54192.1| 392|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform b protein.
Length = 392
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WILT+L Y I F P +++V E V+F L
Sbjct: 119 WILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U41021-1|AAA82333.1| 481|Caenorhabditis elegans Mechanosensory
abnormality protein2, isoform a protein.
Length = 481
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WILT+L Y I F P +++V E V+F L
Sbjct: 119 WILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U26736-1|AAA87552.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WILT+L Y I F P +++V E V+F L
Sbjct: 119 WILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>U26735-1|AAA87551.1| 481|Caenorhabditis elegans MEC-2 protein.
Length = 481
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WILT+L Y I F P +++V E V+F L
Sbjct: 119 WILTILSYLLIFFTLPISACMCIKVVQEYERAVIFRL 155
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3
Query: 233 PDIYSQIEVFYQNYHPL 183
PD+YS+IEV QN HPL
Sbjct: 118 PDMYSKIEVNGQNTHPL 134
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 230 LENAEEVFKHNSWDNVEWDEDQEKKAQEKVRNNSQV-TFTDEHLKSLEEDADK 385
L EE+ + N + +ED EK+ QEK++ ++ E K + +D +K
Sbjct: 219 LRREEEIKQQNQEREKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDDFEK 271
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 304 FFLLVFIPFHIIPRVVFKHFFSIFQISIPK 215
F L VF+ + ++ V ++ F+IF I +PK
Sbjct: 8 FHLCVFVTWQLVNFAVGQYIFNIFSIHVPK 37
>Z66565-10|CAB76415.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WI+T++ Y ++F P L++V E V+F L
Sbjct: 28 WIITIISYLVVLFTLPLSAFFCLKVVQEYERAVIFRL 64
>EF219472-1|ABO25756.1| 127|Caenorhabditis elegans transcription
factor PHA-2 protein.
Length = 127
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 NSWD-NVEWDEDQEKKAQEKVRNNSQVTFTDEHLKSLEEDADKH 388
N WD + W K+ +K R Q+ FT+E +LE D H
Sbjct: 77 NMWDPRLSWLYPCMSKSPQK-RKGGQIRFTNEQTDALEHKFDSH 119
>AL032659-2|CAB82215.1| 281|Caenorhabditis elegans Hypothetical
protein Y71H9A.3 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 636 WILTVLQYWEIVFPTPQPISNMLRIVSLVELRVVFCL 526
WI+T++ Y ++F P L++V E V+F L
Sbjct: 28 WIITIISYLVVLFTLPLSAFFCLKVVQEYERAVIFRL 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,841,397
Number of Sequences: 27780
Number of extensions: 370230
Number of successful extensions: 1227
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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