Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP20_F_C19
(1594 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.11
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.19
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.25
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.25
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.33
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.44
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.58
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 9.5
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPP 721
P HP P P P PP PPPP P P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 824 PTXXPPXXPXPXXXPPPHXXHXXPPHPPXXXPHPPXXP 711
P PP P PP PP PP P PP P
Sbjct: 1686 PVSTPPVRPQSAA--PPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = -2
Query: 825 PHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTP 709
P P P P PPP PP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 23.4 bits (48), Expect(2) = 6.2
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = -3
Query: 923 PXTPPPPHXXXPPXXLPXTXXPXXXXXPX*XXXPTXXPPXXPXP 792
P PPPP PP P P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP--PPLPASSAPSVPNP 1746
Score = 21.8 bits (44), Expect(2) = 6.2
Identities = 9/27 (33%), Positives = 10/27 (37%)
Frame = -3
Query: 1109 PXXXTHTPPXLPXXHPPHNXTXXIPPP 1029
P TPP P P + PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPP 1709
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/88 (26%), Positives = 26/88 (29%), Gaps = 7/88 (7%)
Frame = -2
Query: 876 PPHPTPL---PXXXPXLXXXPHXXPAXXPPXXXXT----PPPPPXXXXPTPPXQXXPPPX 718
PP P P P P + P P+ PP + P P P P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 717 XTPIFXXXXXXSHXXXPXPXPPXXXXPP 634
P P PP PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 32.3 bits (70), Expect = 0.19
Identities = 27/104 (25%), Positives = 29/104 (27%), Gaps = 3/104 (2%)
Frame = -1
Query: 955 SXPXHXPFXXHPXLP---PPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXX 785
S P P P P PP P P P PP P P P P
Sbjct: 993 SAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPL-PSADAPPI--PVPSTAPPVPIPTST 1049
Query: 784 XPPPTXXTXXPHTPXPXXPTPXXHPNIPXXXXXXPXXXXXPXPP 653
P P + P P P P+IP P PP
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 32.3 bits (70), Expect = 0.19
Identities = 24/94 (25%), Positives = 27/94 (28%), Gaps = 1/94 (1%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTP-IFX 700
PP P P P + P P P PPP P P PP P
Sbjct: 1159 PPVPKP-SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Query: 699 XXXXXSHXXXPXPXPPXXXXPPXXXSTXXPXSTT 598
S P P P P S+ P +T
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVST 1251
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/98 (23%), Positives = 26/98 (26%), Gaps = 5/98 (5%)
Frame = -1
Query: 922 PXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPTXXTXXPHTP 743
P PPP + SP P P P P P P P + P P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Query: 742 XP-----XXPTPXXHPNIPXXXXXXPXXXXXPXPPXXP 644
P P P P +P P P P
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAP 1063
Score = 29.9 bits (64), Expect = 1.0
Identities = 19/78 (24%), Positives = 20/78 (25%)
Frame = -2
Query: 867 PTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTPIFXXXXX 688
P P P P + P P P P P P P PP P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 687 XSHXXXPXPXPPXXXXPP 634
P P P PP
Sbjct: 1144 KPSVAAP-PVPAPSGAPP 1160
Score = 29.5 bits (63), Expect = 1.3
Identities = 19/83 (22%), Positives = 20/83 (24%)
Frame = -2
Query: 867 PTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTPIFXXXXX 688
P P P P + P P P P P P P PP P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 687 XSHXXXPXPXPPXXXXPPXXXST 619
P P PP T
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPT 1233
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/90 (23%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Frame = -2
Query: 867 PTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTP-PXQXXPPPXXTPIFXXXX 691
P P+P P + P P P P P P P PP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 690 XXSHXXXPXPXPPXXXXPPXXXSTXXPXST 601
P P P P ST P T
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Score = 28.3 bits (60), Expect = 3.1
Identities = 22/95 (23%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Frame = -1
Query: 916 LPPPPTXXXHHXXSPXPXXPXXXXP-PFXXPP---PXFXRPXPPXXXXXPPPTXXTXXPH 749
+PP P P P P P PP P P P P P
Sbjct: 1011 VPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 748 TPXPXXPTPXXHPNIPXXXXXXPXXXXXPXPPXXP 644
+ P P P P +P P P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 28.3 bits (60), Expect = 3.1
Identities = 21/84 (25%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = -1
Query: 949 PXHXPFXXHPXLPPP---PTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXP 779
P P P +PPP P P P P PP P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVP-PVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Query: 778 PPTXXTXXPHTPXPXXPTPXXHPN 707
P + P P P H N
Sbjct: 1239 VPAPSSEAPSVSTPRSSVPSPHSN 1262
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/80 (23%), Positives = 19/80 (23%)
Frame = -2
Query: 873 PHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTPIFXXX 694
P P P P P P P P P P P PP P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 693 XXXSHXXXPXPXPPXXXXPP 634
P P P PP
Sbjct: 1123 VPKPSVAAP-PVPVPSGAPP 1141
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.19
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = +2
Query: 722 GGGXXWXGGVGXXCXGGGGGVXXXXGGXXAGKXWGXXXKXGXXXGRGVGXGG 877
GG GG G GGG GG G G + G GRG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.6 bits (56), Expect = 9.5
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +2
Query: 722 GGGXXWXGGVGXXCXGGGGGVXXXXGGXXAGKXWGXXXKXGXXXGRGVGXGGXXMVXXXG 901
GG GG G GG GG GG G G G GRG GG G
Sbjct: 9 GGRGGSRGGRGGF-NGGRGGFGGGRGGARGG---GRGGARGGRGGRGGARGGRG--GSSG 62
Query: 902 GGGG 913
G GG
Sbjct: 63 GRGG 66
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.25
Identities = 22/81 (27%), Positives = 25/81 (30%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTPIFXX 697
P PTP P P P+ PP + PP P P P P P+
Sbjct: 128 PAPPTPQSELRPPTSAPPR--PSIPPPSPA-SAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 696 XXXXSHXXXPXPXPPXXXXPP 634
S P PP PP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
Score = 29.9 bits (64), Expect = 1.0
Identities = 23/90 (25%), Positives = 26/90 (28%)
Frame = -1
Query: 922 PXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPTXXTXXPHTP 743
P P PPT P PP PP PP PP P P
Sbjct: 125 PSAPAPPTPQSE-------LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 742 XPXXPTPXXHPNIPXXXXXXPXXXXXPXPP 653
+P P++P P P PP
Sbjct: 178 AAPVKSPPSAPSLP--SAVPPMPPKVPPPP 205
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = -3
Query: 923 PXTPPPPHXXXPPXXLPXTXXPXXXXXPX*XXXPTXXPPXXPXPXXXPPPHXXHXXPP 750
P PPP PP P P P PP P PP PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/79 (24%), Positives = 20/79 (25%), Gaps = 4/79 (5%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPP----PXXXXPTPPXQXXPPPXXTP 709
PP P P P P P PP P P PP PP P
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Query: 708 IFXXXXXXSHXXXPXPXPP 652
+ S P P
Sbjct: 211 VANTSSRPSSFAPPAGHAP 229
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.25
Identities = 23/95 (24%), Positives = 27/95 (28%), Gaps = 1/95 (1%)
Frame = -1
Query: 925 HPXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPTXXTXXPHT 746
+P PPP P P PP PP PP+ P
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 745 PXPXXPTPXXHPNIP-XXXXXXPXXXXXPXPPXXP 644
P P P+ P +P P P PP P
Sbjct: 447 P-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 1.3
Identities = 25/95 (26%), Positives = 27/95 (28%), Gaps = 2/95 (2%)
Frame = -1
Query: 916 LPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPP--PTXXTXXPHTP 743
LPPPP + P P P PPP R P PP + P P
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAP--PPPP--PRSAPSTGRQPPPLSSSRAVSNPPAP 391
Query: 742 XPXXPTPXXHPNIPXXXXXXPXXXXXPXPPXXPXS 638
P P P P PP P S
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTP 709
P P LP P P P PP P PP PP PPP P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIA-PPLPAGMPAAPPL-----PPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = -2
Query: 873 PHPTPLPXXXPXLXXXPHXXPAXXP-PXXXXTPPPPPXXXXPTP 745
P PLP P P PA P P PPP P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 801 PPXXXXTPPPPPXXXXPTPPXQXXPPP 721
PP PPPPP P+ Q PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQ--PPP 378
Score = 27.1 bits (57), Expect = 7.2
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = -3
Query: 926 TPXTPPPPH--XXXPPXXLPXTXXPXXXXXPX*XXXPTXXPPXXPXPXXXP-PPHXXHXX 756
TP P PP PP P P P P P P P P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 755 PPHPPXXXPHP 723
P PP P P
Sbjct: 474 PAPPPAPAPAP 484
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.5 bits (68), Expect = 0.33
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -1
Query: 949 PXHXPFXXHPXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPT 770
P H H +PPPP H P P P PPP P PPP
Sbjct: 211 PMHHKPGEH--MPPPPMH--HEPGEHMPPPPMHHEPGEHMPPPPMHH--EPGEHMPPPPM 264
Query: 769 XXTXXPHTPXP 737
H P P
Sbjct: 265 HHEPGEHMPPP 275
Score = 31.5 bits (68), Expect = 0.33
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -1
Query: 949 PXHXPFXXHPXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPT 770
P H H +PPPP H P P P PPP P PPP
Sbjct: 224 PMHHEPGEH--MPPPPMH--HEPGEHMPPPPMHHEPGEHMPPPPMHH--EPGEHMPPPPM 277
Query: 769 XXTXXPHTPXP 737
H P P
Sbjct: 278 HHEPGEHMPPP 288
Score = 31.5 bits (68), Expect = 0.33
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -1
Query: 949 PXHXPFXXHPXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPT 770
P H H +PPPP H P P P PPP P PPP
Sbjct: 263 PMHHEPGEH--MPPPPMH--HEPGEHMPPPPMHHEPGEHMPPPPMHH--EPGEHMPPPPM 316
Query: 769 XXTXXPHTPXP 737
H P P
Sbjct: 317 HHEPGEHMPPP 327
Score = 31.1 bits (67), Expect = 0.44
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = -1
Query: 949 PXHXPFXXHPXLPPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPT 770
P H H +PPPP H P P P PPP P PPP
Sbjct: 198 PAHHEPGEH--MPPPPMH--HKPGEHMPPPPMHHEPGEHMPPPPMHH--EPGEHMPPPPM 251
Query: 769 XXTXXPHTPXP 737
H P P
Sbjct: 252 HHEPGEHMPPP 262
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.44
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -2
Query: 873 PHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPP 721
P P P P P P P PPPPP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 780 PPPPPXXXXPTPPXQXXPPPXXTPI 706
PPPPP PTP P P PI
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPI 757
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -2
Query: 813 PAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTPIFXXXXXXSHXXXPXPXPP 652
P P TP P P P P PPP P + P P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP---PGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Frame = -1
Query: 922 PXLPPPPTXXXHHXXSP---XPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPP 776
P PPP +P P P PP PPP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = -2
Query: 864 TPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPPPXXTP 709
+P P + P P PP PPP P PPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = -1
Query: 913 PPPPTXXXHHXXSPXPXXPXXXXPPFXXPPPXFXRPXPPXXXXXPPPTXXTXXP 752
PPPP +P P P PPP P PP PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = -2
Query: 876 PPHPTPLPXXXPXLXXXPHXXPAXXPPXXXXTPPPPPXXXXPTPPXQXXPP 724
PP P + P P PA PPPP PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -3
Query: 890 PPXXLPXTXXPXXXXXPX*XXXPTXXPPXXPXPXXXPPPHXXHXXPPHPPXXXP 729
PP P P P P P P PPP PP PP P
Sbjct: 732 PPPPPPAVIVPTPAPAP--IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 810 AXXPPXXXXTPPPPPXXXXPTPPXQXXPP 724
A PP PPPPP P+ P PP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 798 PXXXXTPPPPPXXXXPTPPXQXXPPP 721
P PPPPP PP Q PPP
Sbjct: 5 PPGNPPPPPPPPGF--EPPSQPPPPP 28
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 916 LPPPPTXXXH-HXXSPXPXXPXXXXPPFXXPPPXFXRPXPP 797
L P PT H + SP P P PP + RP P
Sbjct: 551 LNPAPTAMPHPNITSPSPSISVTQRPAVNVGPPPYVRPSAP 591
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,491,350
Number of Sequences: 5004
Number of extensions: 19665
Number of successful extensions: 276
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 899906996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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