Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C19
         (1594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    31   0.092
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.65 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    28   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   2.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   3.4  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   8.0  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 31.1 bits (67), Expect = 0.092
 Identities = 26/93 (27%), Positives = 28/93 (30%), Gaps = 1/93 (1%)
 Frame = +2

Query: 638 GXXXXGGXGXGXXXWXXXXXXXNIGVXXGGGXXWXGGVGXXCXGGGGGVXXXXGGXXAGK 817
           G    GG G G           ++G   G G    GG          G     GG  AG 
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVAGM 712

Query: 818 X-WGXXXKXGXXXGRGVGXGGXXMVXXXGGGGG 913
              G     G   G G   G    V   GGGGG
Sbjct: 713 MSTGAGVNRGGDGGCGSIGGEVGSVGGGGGGGG 745



 Score = 26.6 bits (56), Expect = 2.0
 Identities = 21/81 (25%), Positives = 23/81 (28%), Gaps = 5/81 (6%)
 Frame = +3

Query: 711 GXXXGVGXXGXGVWGXXVXXVGGGXXXXXGGXGRXXXGGGXLX-----GGXXXXGXXGXG 875
           G   G G  G G        +G       GG GR   GGG +       G       G  
Sbjct: 651 GSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSGGGMIGMHSVAAGAAVAAGGGVA 710

Query: 876 EXXWWXXXVGGGGSXGCXXXG 938
                   V  GG  GC   G
Sbjct: 711 GMMSTGAGVNRGGDGGCGSIG 731


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.65
 Identities = 25/95 (26%), Positives = 28/95 (29%), Gaps = 4/95 (4%)
 Frame = +2

Query: 635 GGXXXXGGXGXGXXXWXXXXXXXNIGVXXGGGXXWXGGVGXXCXGGGGGVXXXXG----G 802
           GG    GG G G              V         GG G    GGGGG     G    G
Sbjct: 169 GGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228

Query: 803 XXAGKXWGXXXKXGXXXGRGVGXGGXXMVXXXGGG 907
              G+      +     G G G GG   +   G G
Sbjct: 229 GGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRG 263


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 27.9 bits (59), Expect = 0.85
 Identities = 19/48 (39%), Positives = 19/48 (39%)
 Frame = +2

Query: 767 GGGGGVXXXXGGXXAGKXWGXXXKXGXXXGRGVGXGGXXMVXXXGGGG 910
           GG GG     GG   G   G     G   GRG G GG       GGGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGR----GGGRGRGRGRGGRDGGGGFGGGG 98


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
 Frame = -2

Query: 888 TXXXPPHPT---PLPXXXPXLXXXPHXXPAXXPPXXXXTPP-PPPXXXXPTPPXQXXPPP 721
           T   PP P    P P   P +   P   P   P       P PP       PP    PPP
Sbjct: 207 TQPQPPRPGGMYPQPPGVP-MPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPP 265

Query: 720 XXTP 709
              P
Sbjct: 266 IRPP 269



 Score = 24.6 bits (51), Expect = 8.0
 Identities = 18/69 (26%), Positives = 18/69 (26%), Gaps = 1/69 (1%)
 Frame = -3

Query: 914 PPPPHXXXPPXXLPXTXXPXXXXXPX*XXXP-TXXPPXXPXPXXXPPPHXXHXXPPHPPX 738
           PP  H   P    P    P     P     P    PP    P    PP      P  P  
Sbjct: 165 PPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGV 224

Query: 737 XXPHPPXXP 711
             P  P  P
Sbjct: 225 PMPMRPQMP 233


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.5
 Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 3/52 (5%)
 Frame = -2

Query: 780 PPPPPXXXXPTPPXQXXPPP---XXTPIFXXXXXXSHXXXPXPXPPXXXXPP 634
           PPPPP       P Q  PPP      P F             P  P    PP
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPP 583


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 2.6
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
 Frame = +2

Query: 704 NIGVXXGGGXXWXGGVGXXC--XGGGGGVXXXXGG 802
           N G   GGG    GG    C   GGGGG     GG
Sbjct: 177 NNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGGG 211


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 19/59 (32%), Positives = 20/59 (33%)
 Frame = +3

Query: 654 GGXGXXXXNGXXXXXXGILGXXXGVGXXGXGVWGXXVXXVGGGXXXXXGGXGRXXXGGG 830
           GG G    NG      G +    G G  G    G     VG G     GG G    GGG
Sbjct: 519 GGGGSGCVNGSRTVGAGGMA---GGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGG 574



 Score = 25.0 bits (52), Expect = 6.0
 Identities = 17/59 (28%), Positives = 17/59 (28%)
 Frame = +3

Query: 774 GGGXXXXXGGXGRXXXGGGXLXGGXXXXGXXGXGEXXWWXXXVGGGGSXGCXXXGXCXG 950
           GGG         R    GG   GG       G G         GGGG  G    G   G
Sbjct: 518 GGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGGGVG 576



 Score = 25.0 bits (52), Expect = 6.0
 Identities = 18/62 (29%), Positives = 19/62 (30%)
 Frame = +3

Query: 645 GXXGGXGXXXXNGXXXXXXGILGXXXGVGXXGXGVWGXXVXXVGGGXXXXXGGXGRXXXG 824
           G  GG G    +G      G      G G  G G  G      GG      GG G     
Sbjct: 812 GGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAG--GPLRGSSGGAGGGSSGGGGSGGTS 869

Query: 825 GG 830
           GG
Sbjct: 870 GG 871



 Score = 24.6 bits (51), Expect = 8.0
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +2

Query: 743 GGVGXXCXGGGGGVXXXXGGXXAG 814
           GGVG    GGGGG      G   G
Sbjct: 553 GGVGSGIGGGGGGGGGGRAGGGVG 576


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 8.0
 Identities = 20/70 (28%), Positives = 22/70 (31%), Gaps = 10/70 (14%)
 Frame = -2

Query: 888 TXXXPPHPTPLPXXX--PXLXXXPHXXPAXXPPXXXXTPPP--------PPXXXXPTPPX 739
           T   PP P  +P     P L   P+      PP     PPP        PP      PP 
Sbjct: 82  TMNMPPRPGMIPGMPGAPPLLMGPNGP--LPPPMMGMRPPPMMVPTMGMPPMGLGMRPPV 139

Query: 738 QXXPPPXXTP 709
               PP   P
Sbjct: 140 MSAAPPQLNP 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 429,508
Number of Sequences: 2352
Number of extensions: 6750
Number of successful extensions: 90
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 68
effective length of database: 404,043
effective search space used: 186667866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)