Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP20_F_C17
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.78 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   2.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   7.2  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 23/77 (29%), Positives = 25/77 (32%)
 Frame = -1

Query: 520 PPPPPPXXXKKKKPPPXXPXXFXPQXXAPKXPRXPLFXKKXTFFXPXXXXXXPKNXXXFS 341
           PPPPPP       PP   P    P     + P  PL   +  F  P      P       
Sbjct: 531 PPPPPPGGAVLNIPPQFLP----PPLNLLRAPFFPLNPAQLRF--PAGFPNLPNAQPP-- 582

Query: 340 XFGXXXTPPXWGXPPSP 290
                  PP  G PPSP
Sbjct: 583 --PAPPPPPPMGPPPSP 597


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.8 bits (44), Expect(2) = 2.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 541 GXXTQXXPPPPPP 503
           G  +   PPPPPP
Sbjct: 779 GIGSPPPPPPPPP 791



 Score = 21.8 bits (44), Expect(2) = 2.1
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -1

Query: 520 PPPPPPXXXKKKKP 479
           PPPPPP       P
Sbjct: 783 PPPPPPPPPSSLSP 796


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 12/37 (32%), Positives = 12/37 (32%)
 Frame = -1

Query: 556 PGGGGGXXTQXXPPPPPPXXXKKKKPPPXXPXXFXPQ 446
           PG  G   T     P PP        PP  P    PQ
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQ 231



 Score = 23.4 bits (48), Expect = 9.6
 Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
 Frame = -1

Query: 565 PLXPGGGGGXXTQXXPPPP---PPXXXKKKKPPPXXPXXFXPQXXAPKXPRXP 416
           P  P  G     Q   PP    PP      +P P  P    PQ      P  P
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,088
Number of Sequences: 2352
Number of extensions: 10171
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)